RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 NOXO1Q8NFA2 376 aa19.25■□□□□ 0.67
VEGFA-217ENST00000518538 RSRC1Q96IZ7 334 aaKnown RBP19.25■□□□□ 0.67
VEGFA-217ENST00000518538 MRPL13Q9BYD1 178 aaKnown RBP19.25■□□□□ 0.67
VEGFA-217ENST00000518538 NDEL1Q9GZM8 345 aa19.25■□□□□ 0.67
VEGFA-217ENST00000518538 SIGLEC7Q9Y286 467 aa19.25■□□□□ 0.67
VEGFA-217ENST00000518538 A0A096LPE4 126 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 A0A1W2PPZ6 126 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 DPRXA6NFQ7 191 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 TNFRSF11BO00300 401 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 OR10H3O60404 316 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 PTP4A3O75365 173 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 TRMUO75648 421 aaKnown RBP19.24■□□□□ 0.67
VEGFA-217ENST00000518538 CD3EP07766 207 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 ACADSP16219 412 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 PAX7P23759 505 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 UBE2NP61088 152 aaKnown RBP19.24■□□□□ 0.67
VEGFA-217ENST00000518538 RPL27P61353 136 aaKnown RBP19.24■□□□□ 0.67
VEGFA-217ENST00000518538 BSPH1Q075Z2 132 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 TOP3AQ13472 1001 aaPredicted RBP19.24■□□□□ 0.67
VEGFA-217ENST00000518538 HIST3H3Q16695 136 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 FAM205BPQ63HN1 556 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 OR2T5Q6IEZ7 315 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 KLHL17Q6TDP4 642 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 ZNF704Q6ZNC4 412 aaPredicted RBP19.24■□□□□ 0.67
VEGFA-217ENST00000518538 ZNF627Q7L945 461 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 ZER1Q7Z7L7 766 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 SPATA24Q86W54 205 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 OR2T29Q8NH02 315 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 CANT1Q8WVQ1 401 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 CHID1Q9BWS9 393 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 LIME1Q9H400 295 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 ZNF346Q9UL40 294 aaKnown RBP19.24■□□□□ 0.67
VEGFA-217ENST00000518538 EDARQ9UNE0 448 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 POFUT2Q9Y2G5 429 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 RNF115Q9Y4L5 304 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 NOTCH2Q04721 2471 aa19.24■□□□□ 0.67
VEGFA-217ENST00000518538 UNC119BA6NIH7 251 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 ZNF26P17031 533 aaPredicted RBP19.23■□□□□ 0.67
VEGFA-217ENST00000518538 FPR3P25089 353 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 RPL4P36578 427 aaKnown RBP19.23■□□□□ 0.67
VEGFA-217ENST00000518538 ZNF83P51522 516 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 LRFN4Q6PJG9 635 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 TMEM108Q6UXF1 575 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 PAMR1Q6UXH9 720 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 OR4C15Q8NGM1 316 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 GPA33Q99795 319 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 FOXB1Q99853 325 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 KATNB1Q9BVA0 655 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 ST6GALNAC2Q9UJ37 374 aa19.23■□□□□ 0.67
VEGFA-217ENST00000518538 PRR14LQ5THK1 2151 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 TCRBV3S1A0A5B6 114 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 SEC14L2O76054 403 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 NDUFB2O95178 105 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 PLAUP00749 431 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 CD14P08571 375 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 QDPRP09417 244 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 PTAFRP25105 342 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 C1orf94Q6P1W5 598 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 CCDC36Q8IYA8 594 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 LINC00471Q8N535 108 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 ZNF519Q8TB69 540 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 HDAC2Q92769 488 aaKnown RBP19.22■□□□□ 0.67
VEGFA-217ENST00000518538 NINJ1Q92982 152 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 TSPAN32Q96QS1 320 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 GPX7Q96SL4 187 aaPredicted RBP19.22■□□□□ 0.67
VEGFA-217ENST00000518538 C1QTNF6Q9BXI9 259 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 REEP1Q9H902 201 aa19.22■□□□□ 0.67
VEGFA-217ENST00000518538 MOV10Q9HCE1 1003 aaKnown RBP19.22■□□□□ 0.67
VEGFA-217ENST00000518538 ABCA4P78363 2273 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 A6NIZ1 184 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 M0R1B8 84 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 DHHO43323 396 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 NR2C1P13056 603 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 CD40P25942 277 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 ACVR1BP36896 505 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 GSSP48637 474 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 ZNF133P52736 654 aaPredicted RBP19.21■□□□□ 0.67
VEGFA-217ENST00000518538 RAP1BP61224 184 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 RAP1AP62834 184 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 ERVK-25P63136 954 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 PGBD2Q6P3X8 592 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 ZNF813Q6ZN06 617 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 CCDC121Q6ZUS5 278 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 ALPK2Q86TB3 2170 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 SYT14Q8NB59 555 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 GNPDA2Q8TDQ7 276 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 MCHR2Q969V1 340 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 KCNK17Q96T54 332 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 ALG12Q9BV10 488 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 UBTD1Q9HAC8 227 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 VNN3Q9NY84 501 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 GRHPRQ9UBQ7 328 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 MGAT4BQ9UQ53 548 aa19.21■□□□□ 0.67
VEGFA-217ENST00000518538 SAMHD1Q9Y3Z3 626 aaKnown RBP19.21■□□□□ 0.67
VEGFA-217ENST00000518538 CCNB2O95067 398 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 CST1P01037 141 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 RAF1P04049 648 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 FXYD6P3P58550 94 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 TUBA1BP68363 451 aa19.2■□□□□ 0.66
VEGFA-217ENST00000518538 TUBA4AP68366 448 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms