RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PAX5Q02548 391 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 KCTD21Q4G0X4 260 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 TSPO2Q5TGU0 170 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 PRAMEF5Q5TYX0 476 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 PRAMEF6Q5VXH4 476 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 RUFY3Q7L099 469 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 ACTRT1Q8TDG2 376 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 SDR42E1Q8WUS8 393 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 TAAR1Q96RJ0 339 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 SH3GL1Q99961 368 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 PISDQ9UG56 409 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 CTNNA3Q9UI47 895 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 N6AMT1Q9Y5N5 214 aa3.16□□□□□ -1.9
HMGCS1-207ENST00000514610 CEMIPQ8WUJ3 1361 aa3.15□□□□□ -1.9
HMGCS1-207ENST00000514610 SYNJ2BP-COX16A0A087WUM0 186 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 CST1P01037 141 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 C2P06681 752 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 CASP14P31944 242 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 RORAP35398 523 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 ACTR3P61158 418 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 RPS21P63220 83 aaKnown RBP3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 KCNJ2P63252 427 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 LRRC63Q05C16 580 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 BST2Q10589 180 aaKnown RBP3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 EIF4EBP2Q13542 120 aaPredicted RBP3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 EBI3Q14213 229 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 GGTLC2Q14390 218 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 ZBED5Q49AG3 693 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 VAX1Q5SQQ9 334 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 ZFP2Q6ZN57 461 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 C12orf56Q8IXR9 622 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 UBE2J2Q8N2K1 259 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 TMEM54Q969K7 222 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 CEP170P1Q96L14 293 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 GABARAPL3Q9BY60 117 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 SLC17A9Q9BYT1 436 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 IKZF2Q9UKS7 526 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 HPCAL4Q9UM19 191 aa3.15□□□□□ -1.91
HMGCS1-207ENST00000514610 A0A0U1RQS6 177 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 ICOSLGO75144 302 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 ERLIN2O94905 339 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 BGLAPP02818 100 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 SLC2A3P11169 496 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 FOLR1P15328 257 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 RFX3P48380 749 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 RORCP51449 518 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 CCR8P51685 355 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 SUCLG1P53597 346 aaKnown RBP3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 ZNF92Q03936 586 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 SMARCB1Q12824 385 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 RABL6Q3YEC7 729 aaPredicted RBP3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 TFDP3Q5H9I0 405 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 OR52W1Q6IF63 320 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 HSD17B11Q8NBQ5 300 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 OR9K2Q8NGE7 335 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 PLPPR1Q8TBJ4 325 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 ZNF596Q8TC21 504 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 KCTD14Q9BQ13 255 aaPredicted RBP3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 ECSITQ9BQ95 431 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 TPK1Q9H3S4 243 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 KLHL28Q9NXS3 571 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 CSDC2Q9Y534 153 aaKnown RBP3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 NFASCO94856 1347 aa3.14□□□□□ -1.91
HMGCS1-207ENST00000514610 LRP4O75096 1905 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 IGLV4-69A0A075B6H9 119 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 PRSS37A4D1T9 235 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 H3BNH8 94 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 SERPIND1P05546 499 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 PLEKP08567 350 aaPredicted RBP3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 TFPI2P48307 235 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 GPX6P59796 221 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 COA6Q5JTJ3 125 aaKnown RBP3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 ZNF691Q5VV52 312 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 LINC01551Q86U37 167 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 CDR2LQ86X02 465 aaPredicted RBP3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 SLC22A9Q8IVM8 553 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 STPG2Q8N412 459 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 MS4A15Q8N5U1 240 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 NECAB1Q8N987 351 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 CD300LFQ8TDQ1 290 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 GEMIN6Q8WXD5 167 aaKnown RBP3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 WFIKKN1Q96NZ8 548 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 GPR61Q9BZJ8 451 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 INPP5EQ9NRR6 644 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 TBX21Q9UL17 535 aa3.13□□□□□ -1.91
HMGCS1-207ENST00000514610 IGKV3-11P04433 115 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 UQCRFS1P1P0C7P4 283 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 SMIM10L1P0DMW3 83 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 MCF2P10911 925 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 ZNF43P17038 809 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 MAGP20916 626 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 PBLDP30039 288 aaPredicted RBP3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 CDKN1BP46527 198 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 HMGCS1Q01581 520 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 ENPEPQ07075 957 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 ARHGAP19Q14CB8 494 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 PTGES3Q15185 160 aaKnown RBP3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 TTLL9Q3SXZ7 439 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 KRTAP13-3Q3SY46 172 aa3.12□□□□□ -1.91
HMGCS1-207ENST00000514610 Q6ZSR3 168 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms