RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TP53P04637 393 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 PGA4P0DJD7 388 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 PGA3P0DJD8 388 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 FCGR1AP12314 374 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 COX5AP20674 150 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 UGT2B10P36537 528 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 ACVR1BP36896 505 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 CSNK1A1P48729 337 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 DAP3P51398 398 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 ROR2Q01974 943 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 CD47Q08722 323 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 KRR1Q13601 381 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 STK11Q15831 433 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 MESTQ5EB52 335 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 ARMC4Q5T2S8 1044 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 ZFP1Q6P2D0 407 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 KLHL17Q6TDP4 642 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 Q6ZT83 130 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 BEND4Q6ZU67 534 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 C22orf34Q6ZV56 151 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 C20orf196Q8IYI0 205 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 GPR137CQ8N3F9 429 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 NOXO1Q8NFA2 376 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 OR6N1Q8NGY5 312 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 OR4Q3Q8NH05 313 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 OR5K1Q8NHB7 308 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF519Q8TB69 540 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 STMN2Q93045 179 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 S100PBPQ96BU1 408 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 ZC3HAV1LQ96H79 300 aaKnown RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 ULBP2Q9BZM5 246 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 FN3KQ9H479 309 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 PARPBPQ9NWS1 579 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 ASB6Q9NWX5 421 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 MALT1Q9UDY8 824 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 OAZ3Q9UMX2 235 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 MGAT4BQ9UQ53 548 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 IER3IP1Q9Y5U9 82 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 KLF2Q9Y5W3 355 aaPredicted RBP8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 CDH10Q9Y6N8 788 aa8.63□□□□□ -1.03
TOPBP1-209ENST00000513818 HECTD1Q9ULT8 2610 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 A0A096LPE4 126 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 IGKV1D-43A0A0B4J1Z2 117 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 A0A1W2PPZ6 126 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 HTR3EA5X5Y0 456 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 ARRDC5A6NEK1 342 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF587BE7ETH6 402 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 G3V2T6 193 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 ARHGEF9O43307 516 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 IGHG1P01857 330 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 CD14P08571 375 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 HOXB6P17509 224 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 IL32P24001 234 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 POU1F1P28069 291 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 SLC6A6P31641 620 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 DAPP51397 102 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 CLRN1P58418 232 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 PRPS1P60891 318 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 RPL27P61353 136 aaKnown RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 TUBA1BP68363 451 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 TUBA4AP68366 448 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 RCN1Q15293 331 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 CEACAM16Q2WEN9 425 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 RFX4Q33E94 735 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 SLC36A3Q495N2 470 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 HIKESHIQ53FT3 197 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 SLC35F1Q5T1Q4 408 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 SFRP5Q5T4F7 317 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 OTPQ5XKR4 325 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 RASSF6Q6ZTQ3 369 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 TUBA1AQ71U36 451 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 BHLHA15Q7RTS1 189 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 FAM122BQ7Z309 247 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 PQLC1Q8N2U9 271 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 LINC00471Q8N535 108 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 SDR9C7Q8NEX9 313 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 OR6X1Q8NH79 312 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 MAGEE2Q8TD90 523 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 NSMAFQ92636 917 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 KISS1RQ969F8 398 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 TMEM54Q969K7 222 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF566Q969W8 418 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 CENPNQ96H22 339 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 SLC25A44Q96H78 314 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 FOXN4Q96NZ1 517 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 ERMAPQ96PL5 475 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 GPX7Q96SL4 187 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 BDH2Q9BUT1 245 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 IFT27Q9BW83 186 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 DGCR6LQ9BY27 220 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 ACTR6Q9GZN1 396 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 TXNIPQ9H3M7 391 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 CRLF2Q9HC73 371 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 GPR35Q9HC97 309 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 CRIM1Q9NZV1 1036 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 REV1Q9UBZ9 1251 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 FOXD3Q9UJU5 478 aaPredicted RBP8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 DCHS2Q6V1P9 2916 aa8.62□□□□□ -1.03
TOPBP1-209ENST00000513818 ALPK2Q86TB3 2170 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms