RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 IGFN1Q86VF2 1251 aa13.89□□□□□ -0.19
DDX41-214ENST00000512334 OR13C2Q8NGS9 318 aa13.89□□□□□ -0.19
DDX41-214ENST00000512334 SMAP2Q8WU79 429 aaPredicted RBP13.89□□□□□ -0.19
DDX41-214ENST00000512334 KCNS3Q9BQ31 491 aa13.89□□□□□ -0.19
DDX41-214ENST00000512334 CXorf56Q9H5V9 222 aa13.89□□□□□ -0.19
DDX41-214ENST00000512334 ACTR3BQ9P1U1 418 aa13.89□□□□□ -0.19
DDX41-214ENST00000512334 PRPF19Q9UMS4 504 aaKnown RBP13.89□□□□□ -0.19
DDX41-214ENST00000512334 TMEM5Q9Y2B1 443 aa13.89□□□□□ -0.19
DDX41-214ENST00000512334 PRRC2AP48634 2157 aaKnown RBP13.88□□□□□ -0.19
DDX41-214ENST00000512334 IGHV1-18A0A0C4DH31 117 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 TRBV4-1A0A0J9YWV2 114 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 UBOX5O94941 541 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 SEMG1P04279 462 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 QDPRP09417 244 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 TSPAN19P0C672 248 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 PGA4P0DJD7 388 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 PGA3P0DJD8 388 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 CD79AP11912 226 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 B4GALT1P15291 398 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 ATP6V1B2P21281 511 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 PAX7P23759 505 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 SLC9A3P48764 834 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 SMIM11AP58511 58 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 CTXN1P60606 82 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 MYBPC1Q00872 1141 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 RUNX1T1Q06455 604 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 NPRL3Q12980 569 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 SYT14Q8NB59 555 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 NOXO1Q8NFA2 376 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 ASB10Q8WXI3 467 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 CCDC124Q96CT7 223 aaKnown RBP13.88□□□□□ -0.19
DDX41-214ENST00000512334 PERPQ96FX8 193 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 FAM46AQ96IP4 442 aaKnown RBP13.88□□□□□ -0.19
DDX41-214ENST00000512334 SLC38A2Q96QD8 506 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 TNFRSF13CQ96RJ3 184 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 ZNF347Q96SE7 839 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 SEPHS2Q99611 448 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 C1orf21Q9H246 121 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 KRCC1Q9NPI7 259 aaPredicted RBP13.88□□□□□ -0.19
DDX41-214ENST00000512334 TAS2R1Q9NYW7 299 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 STX18Q9P2W9 335 aaKnown RBP13.88□□□□□ -0.19
DDX41-214ENST00000512334 ATP23Q9Y6H3 246 aa13.88□□□□□ -0.19
DDX41-214ENST00000512334 HEATR1Q9H583 2144 aaKnown RBP13.88□□□□□ -0.19
DDX41-214ENST00000512334 ATP6V1G2-DDX39BF2Z307 99 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 CDC42EP2O14613 210 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 TRMUO75648 421 aaKnown RBP13.87□□□□□ -0.19
DDX41-214ENST00000512334 GADD45GO95257 159 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 STAMBPO95630 424 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 ACADSP16219 412 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 RPL4P36578 427 aaKnown RBP13.87□□□□□ -0.19
DDX41-214ENST00000512334 RPS4XP62701 263 aaKnown RBP13.87□□□□□ -0.19
DDX41-214ENST00000512334 NKX6-1P78426 367 aaPredicted RBP13.87□□□□□ -0.19
DDX41-214ENST00000512334 MTX3Q5HYI7 312 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 LRFN4Q6PJG9 635 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 DHFR2Q86XF0 187 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 ZDHHC21Q8IVQ6 265 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 CCDC36Q8IYA8 594 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 OR4K5Q8NGD3 323 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 NANOS1Q8WY41 292 aaKnown RBP13.87□□□□□ -0.19
DDX41-214ENST00000512334 CLPTM1LQ96KA5 538 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 THTPAQ9BU02 230 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 NDEL1Q9GZM8 345 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 TXNIPQ9H3M7 391 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 MUC13Q9H3R2 512 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 MOV10Q9HCE1 1003 aaKnown RBP13.87□□□□□ -0.19
DDX41-214ENST00000512334 FAIMQ9NVQ4 179 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 MOKQ9UQ07 419 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 AURKCQ9UQB9 309 aa13.87□□□□□ -0.19
DDX41-214ENST00000512334 ZNF503-AS2A6NEH8 195 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 E7EQL1 145 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 DHHO43323 396 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 HLA-HP01893 362 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 SOD3P08294 240 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 DANCRP0C864 163 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 CBR1P16152 277 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 ACVR1BP36896 505 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 IDH3GP51553 393 aaPredicted RBP13.86□□□□□ -0.19
DDX41-214ENST00000512334 RPL27P61353 136 aaKnown RBP13.86□□□□□ -0.19
DDX41-214ENST00000512334 PIGFQ07326 219 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 CD47Q08722 323 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 TRIM25Q14258 630 aaKnown RBP13.86□□□□□ -0.19
DDX41-214ENST00000512334 SEC23BQ15437 767 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 TAF11Q15544 211 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 PGGHGQ32M88 737 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 ANKDD1AQ495B1 522 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 ZBED5Q49AG3 693 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 IQCCQ4KMZ1 466 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 B3GLCTQ6Y288 498 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 TMPRSS11FQ6ZWK6 438 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 MDP1Q86V88 176 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 MCHR2Q969V1 340 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 GTPBP3Q969Y2 492 aaKnown RBP13.86□□□□□ -0.19
DDX41-214ENST00000512334 DHRS1Q96LJ7 313 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 LRGUKQ96M69 825 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 DHRS9Q9BPW9 319 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 IL1RAPQ9NPH3 570 aa13.86□□□□□ -0.19
DDX41-214ENST00000512334 CRNNQ9UBG3 495 aaPredicted RBP13.86□□□□□ -0.19
DDX41-214ENST00000512334 ZNF346Q9UL40 294 aaKnown RBP13.86□□□□□ -0.19
DDX41-214ENST00000512334 NPIPB13A6NJU9 1138 aa13.85□□□□□ -0.19
DDX41-214ENST00000512334 CENPBD1B2RD01 187 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms