RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CDC73Q6P1J9 531 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 FIP1L1Q6UN15 594 aaKnown RBP7.73□□□□□ -1.17
NUP54-211ENST00000512151 DHDDSQ86SQ9 333 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 COX18Q8N8Q8 333 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 PNPT1Q8TCS8 783 aaKnown RBP7.73□□□□□ -1.17
NUP54-211ENST00000512151 SFXN5Q8TD22 340 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 CDS1Q92903 461 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 RAB8BQ92930 207 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 TMEM45BQ96B21 275 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 CMTM5Q96DZ9 223 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 ZHX1-C8orf76Q96EF9 292 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 CPPED1Q9BRF8 314 aaPredicted RBP7.73□□□□□ -1.17
NUP54-211ENST00000512151 SLC35A5Q9BS91 424 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 THUMPD3Q9BV44 507 aaKnown RBP7.73□□□□□ -1.17
NUP54-211ENST00000512151 MS4A7Q9GZW8 240 aaPredicted RBP7.73□□□□□ -1.17
NUP54-211ENST00000512151 MMADHCQ9H3L0 296 aaPredicted RBP7.73□□□□□ -1.17
NUP54-211ENST00000512151 TCF7L1Q9HCS4 588 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 CTPS2Q9NRF8 586 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 ACER3Q9NUN7 267 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 PCDHGB4Q9UN71 923 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 RNF114Q9Y508 228 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 AUP1Q9Y679 476 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 KCNE3Q9Y6H6 103 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 RNF103-CHMP3A0A140T963 221 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 PRAMEF27A3QJZ7 478 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 TMEM229AB2RXF0 380 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 CLIC1O00299 241 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 GSC2O15499 205 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 TRAF3IP2O43734 574 aaPredicted RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 ANP32DO95626 131 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 HMGN2P05204 90 aaKnown RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 IMPDH2P12268 514 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 MNAT1P51948 309 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 RPS26P62854 115 aaKnown RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 POU6F2P78424 691 aaPredicted RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 LRRC74AQ0VAA2 488 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 NPRL3Q12980 569 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 ZNF154Q13106 437 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 SKP2Q13309 424 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 TP53BP2Q13625 1128 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 OTUD3Q5T2D3 398 aaPredicted RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 SWT1Q5T5J6 900 aaKnown RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 AAED1Q7RTV5 226 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 MDP1Q86V88 176 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 ADGRG3Q86Y34 549 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 POMGNT2Q8NAT1 580 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 OR5D16Q8NGK9 328 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 LINC01006Q8NI28 216 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 MAGEE2Q8TD90 523 aaPredicted RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 GTF3AQ92664 365 aaKnown RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 NEURL3Q96EH8 262 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 WWC2-AS2Q96NR7 200 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 MS4A4EQ96PG1 132 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 ALKBH3Q96Q83 286 aaPredicted RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 CGREF1Q99674 301 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 BTBD2Q9BX70 525 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 CADM1Q9BY67 442 aaKnown RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 MARCH7Q9H992 704 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 EFCAB1Q9HAE3 211 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 TPT1P8Q9HAU6 139 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 CRLF2Q9HC73 371 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 SERINC1Q9NRX5 453 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 TAS2R1Q9NYW7 299 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 GMPR2Q9P2T1 348 aaKnown RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 PURGQ9UJV8 347 aaKnown RBP7.72□□□□□ -1.17
NUP54-211ENST00000512151 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
NUP54-211ENST00000512151 PPIAL4EA0A075B759 164 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 PPIAL4CA0A0B4J2A2 164 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 CENPVL1A0A0U1RR11 272 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 B2RBV5 119 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 PPIAL4DF5H284 164 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 H0YL77 283 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 GPR37O15354 613 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 GYG2O15488 501 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 ZNF264O43296 627 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 FRS3O43559 492 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 DNPH1O43598 174 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 EIF4E2O60573 245 aaKnown RBP7.71□□□□□ -1.17
NUP54-211ENST00000512151 BCAS1O75363 584 aaPredicted RBP7.71□□□□□ -1.17
NUP54-211ENST00000512151 UPK3AO75631 287 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 ALOX5P09917 674 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 PPIAL4FP0DN26 164 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 UBL4AP11441 157 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 ZNF12P17014 697 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 CCNA2P20248 432 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 MATN1P21941 496 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 SLC6A2P23975 617 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 MTNR1AP48039 350 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 NUDT2P50583 147 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 GZMMP51124 257 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 ATP12AP54707 1039 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 MTPNP58546 118 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 CCL8P80075 99 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 COL10A1Q03692 680 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 CBFBQ13951 182 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 LASP1Q14847 261 aaKnown RBP7.71□□□□□ -1.17
NUP54-211ENST00000512151 MAPK11Q15759 364 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 TRMT5Q32P41 509 aaKnown RBP7.71□□□□□ -1.17
NUP54-211ENST00000512151 SPDYE7PQ495Y7 208 aa7.71□□□□□ -1.17
NUP54-211ENST00000512151 RABL3Q5HYI8 236 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms