RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 HSP90AB3PQ58FF7 597 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 TMEM255AQ5JRV8 349 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 CARD17Q5XLA6 110 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 LRRC66Q68CR7 880 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 C19orf35Q6ZS72 473 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 TTC5Q8N0Z6 440 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 MS4A15Q8N5U1 240 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 SLC22A8Q8TCC7 542 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 ACER1Q8TDN7 264 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 ZNF578Q96N58 590 aaPredicted RBP3.72□□□□□ -1.81
CHD1-206ENST00000511067 RARRES2Q99969 163 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 SLC25A37Q9NYZ2 338 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 SHPKQ9UHJ6 478 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 TP53TG5Q9Y2B4 290 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 NSD2O96028 1365 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 MSH6P52701 1360 aa3.72□□□□□ -1.81
CHD1-206ENST00000511067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHD1-206ENST00000511067 SMCO3A2RU48 225 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 TCP11X1B4DZS4 312 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 PABPC4LP0CB38 370 aaKnown RBP3.71□□□□□ -1.82
CHD1-206ENST00000511067 PNMA6AP0CW24 399 aaPredicted RBP3.71□□□□□ -1.82
CHD1-206ENST00000511067 MGMTP16455 207 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 OTX1P32242 354 aaPredicted RBP3.71□□□□□ -1.82
CHD1-206ENST00000511067 FOXN2P32314 431 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 SSR4P51571 173 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 CCNHP51946 323 aaPredicted RBP3.71□□□□□ -1.82
CHD1-206ENST00000511067 FGF8P55075 233 aaPredicted RBP3.71□□□□□ -1.82
CHD1-206ENST00000511067 CDH6P55285 790 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 CCNA1P78396 465 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 UNC119Q13432 240 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 FZD2Q14332 565 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 SASS6Q6UVJ0 657 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 CERS6Q6ZMG9 384 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 NIPA1Q7RTP0 329 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 GTPBP8Q8N3Z3 284 aaPredicted RBP3.71□□□□□ -1.82
CHD1-206ENST00000511067 DTX3LQ8TDB6 740 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 SDR42E1Q8WUS8 393 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 SLC38A4Q969I6 547 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 TMEM54Q969K7 222 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 OSBPL10Q9BXB5 764 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 RACGAP1Q9H0H5 632 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 VPS37BQ9H9H4 285 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 RAB20Q9NX57 234 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 CACNG2Q9Y698 323 aa3.71□□□□□ -1.82
CHD1-206ENST00000511067 IGKV1D-13A0A0B4J2D9 117 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 TRBV11-1A0A0K0K1C0 115 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 ZNF726A6NNF4 738 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 XKRYO14609 159 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 SMIM10L1P0DMW3 83 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 IGKV1-13P0DP09 117 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 MDKP21741 143 aaPredicted RBP3.7□□□□□ -1.82
CHD1-206ENST00000511067 NSG1P42857 185 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 CCR8P51685 355 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 RCN1Q15293 331 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 PRAMEF20Q5VT98 475 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 SLC8B1Q6J4K2 584 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 LCN12Q6JVE5 192 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 Q6ZSR3 168 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 ZNF429Q86V71 674 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 THOC6Q86W42 341 aaKnown RBP3.7□□□□□ -1.82
CHD1-206ENST00000511067 PDIK1LQ8N165 341 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 CCDC54Q8NEL0 328 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 OR51G1Q8NGK1 321 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 OR1S2Q8NGQ3 325 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 RHEBL1Q8TAI7 183 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 MCUR1Q96AQ8 359 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 SGK3Q96BR1 496 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 MED8Q96G25 268 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 SMIM10Q96HG1 83 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 TSNARE1Q96NA8 513 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 CHP1Q99653 195 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 FAM192AQ9GZU8 254 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 CLMPQ9H6B4 373 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 NEK6Q9HC98 313 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 CTPS2Q9NRF8 586 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 ZNF226Q9NYT6 803 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 TRAPPC4Q9Y296 219 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 USP47Q96K76 1375 aa3.7□□□□□ -1.82
CHD1-206ENST00000511067 COL16A1Q07092 1604 aaPredicted RBP3.7□□□□□ -1.82
CHD1-206ENST00000511067 NACAE9PAV3 2078 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 TRAV39A0A0B4J263 110 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 A0A1B0GVI7 797 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 MRPS12O15235 138 aaKnown RBP3.69□□□□□ -1.82
CHD1-206ENST00000511067 EEDO75530 441 aaKnown RBP3.69□□□□□ -1.82
CHD1-206ENST00000511067 FGGP02679 453 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 ZNF24P17028 368 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 RRM2P31350 389 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 ZNF133P52736 654 aaPredicted RBP3.69□□□□□ -1.82
CHD1-206ENST00000511067 YWHAGP61981 247 aaKnown RBP eCLIP3.69□□□□□ -1.82
CHD1-206ENST00000511067 IRX3P78415 501 aaPredicted RBP3.69□□□□□ -1.82
CHD1-206ENST00000511067 TGM3Q08188 693 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 AQP6Q13520 282 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 ZNF621Q6ZSS3 439 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 C6orf120Q7Z4R8 191 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 MKXQ8IYA7 352 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 EID2Q8N6I1 236 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 ACMSDQ8TDX5 336 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 CXorf40AQ8TE69 158 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 CCDC126Q96EE4 140 aa3.69□□□□□ -1.82
CHD1-206ENST00000511067 AURKBQ96GD4 344 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms