RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MIER2Q8N344 545 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 SCAIQ8N9R8 606 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 SLC47A1Q96FL8 570 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 EBF4Q9BQW3 602 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 ULBP2Q9BZM5 246 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 MS4A5Q9H3V2 200 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 ESM1Q9NQ30 184 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
RAB40C-202ENST00000509637 DUSP13Q9UII6 198 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 GMEB1Q9Y692 573 aa13.59□□□□□ -0.23
RAB40C-202ENST00000509637 LOC105371242A0A075B767 164 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 TMEM89A2RUT3 159 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 M0R3H8 397 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 CDC14BO60729 498 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 SERPINA5P05154 406 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 ERCC1P07992 297 aaPredicted RBP13.58□□□□□ -0.24
RAB40C-202ENST00000509637 GPX2P18283 190 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 DUSP7Q16829 419 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 REEP3Q6NUK4 255 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 C5orf46Q6UWT4 87 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 DLEU7Q6UYE1 221 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 PXKQ7Z7A4 578 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 PTOV1Q86YD1 416 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 SMYD1Q8NB12 490 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 OR6N1Q8NGY5 312 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 TMPRSS13Q9BYE2 586 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 OR51B6Q9H340 312 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 TAAR3PQ9P1P4 343 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 CORINQ9Y5Q5 1042 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 NOX1Q9Y5S8 564 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 USH1CQ9Y6N9 552 aa13.58□□□□□ -0.24
RAB40C-202ENST00000509637 IGLV3-9A0A075B6K5 115 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 SLCO1B7G3V0H7 640 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 PPIHO43447 177 aaKnown RBP13.57□□□□□ -0.24
RAB40C-202ENST00000509637 AHCYP23526 432 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 COMPP49747 757 aaPredicted RBP13.57□□□□□ -0.24
RAB40C-202ENST00000509637 ARFIP2P53365 341 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 TMEM33P57088 247 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 RGS8P57771 180 aaPredicted RBP13.57□□□□□ -0.24
RAB40C-202ENST00000509637 CCL8P80075 99 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 SELPLGQ14242 412 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 MELKQ14680 651 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 SLC22A24Q8N4F4 322 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 RNF217Q8TC41 542 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 TLCD1Q96CP7 247 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 ARHGDIGQ99819 225 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 TMEM43Q9BTV4 400 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 ASPNQ9BXN1 380 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 TMEM38BQ9NVV0 291 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 GLTPQ9NZD2 209 aa13.57□□□□□ -0.24
RAB40C-202ENST00000509637 TESQ9UGI8 421 aaKnown RBP13.57□□□□□ -0.24
RAB40C-202ENST00000509637 A0A0A6YYJ9 748 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 TMEM247A6NEH6 219 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 ZNF726A6NNF4 738 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 C17orf100A8MU93 164 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 C5orf58C9J3I9 102 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 SPRY1O43609 319 aaPredicted RBP13.56□□□□□ -0.24
RAB40C-202ENST00000509637 PLPP2O43688 288 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 AKAP8O43823 692 aaKnown RBP13.56□□□□□ -0.24
RAB40C-202ENST00000509637 TFP02787 698 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 OPN1SWP03999 348 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 ADORA3P0DMS8 318 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 ZNF250P15622 560 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 ADRA2CP18825 462 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 CSNK1A1P48729 337 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 IDH3AP50213 366 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 CRYBA2P53672 197 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 PCBP3P57721 371 aaKnown RBP13.56□□□□□ -0.24
RAB40C-202ENST00000509637 MAGOHP61326 146 aaKnown RBP13.56□□□□□ -0.24
RAB40C-202ENST00000509637 MVKQ03426 396 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 SCARB2Q14108 478 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 FAHD2BQ6P2I3 314 aaPredicted RBP13.56□□□□□ -0.24
RAB40C-202ENST00000509637 SLC35D2Q76EJ3 337 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 PEG10Q86TG7 708 aaKnown RBP13.56□□□□□ -0.24
RAB40C-202ENST00000509637 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 ZDHHC22Q8N966 263 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 OR6T1Q8NGN1 323 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 OR5J2Q8NH18 312 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 OR6X1Q8NH79 312 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 FAHD2AQ96GK7 314 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 MCHR1Q99705 422 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 CPPED1Q9BRF8 314 aaPredicted RBP13.56□□□□□ -0.24
RAB40C-202ENST00000509637 TMEM38AQ9H6F2 299 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 TMEM27Q9HBJ8 222 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 SLCO1B3Q9NPD5 702 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 OPN4Q9UHM6 478 aa13.56□□□□□ -0.24
RAB40C-202ENST00000509637 IGKV1D-43A0A0B4J1Z2 117 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 DHHO43323 396 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 UBL3O95164 117 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 CH25HO95992 272 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 PGA4P0DJD7 388 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 PGA3P0DJD8 388 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 SLC18A1P54219 525 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 HILS1P60008 231 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 MRPS11P82912 194 aaKnown RBP13.55□□□□□ -0.24
RAB40C-202ENST00000509637 ZP4Q12836 540 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 ZNF74Q16587 644 aa13.55□□□□□ -0.24
RAB40C-202ENST00000509637 GKAP1Q5VSY0 366 aaPredicted RBP13.55□□□□□ -0.24
RAB40C-202ENST00000509637 PIWIL3Q7Z3Z3 882 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms