RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 FAM220AQ7Z4H9 259 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 NRARPQ7Z6K4 114 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 ZNF554Q86TJ5 538 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 WDSUB1Q8N9V3 476 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 POC1BQ8TC44 478 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 WDR54Q9H977 334 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 NOX4Q9NPH5 578 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 NXT1Q9UKK6 140 aaKnown RBP13.39□□□□□ -0.27
PHF3-209ENST00000509330 B9D1Q9UPM9 204 aa13.39□□□□□ -0.27
PHF3-209ENST00000509330 COA3Q9Y2R0 106 aaPredicted RBP13.39□□□□□ -0.27
PHF3-209ENST00000509330 IGKV1D-43A0A0B4J1Z2 117 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 FTCDNL1E5RQL4 147 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 NPIPA5E9PKD4 350 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 MS4A18H0YCH9 400 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 DXOO77932 396 aaKnown RBP13.38□□□□□ -0.27
PHF3-209ENST00000509330 TXNDC12O95881 172 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 FBXO45P0C2W1 286 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 ELK1P19419 428 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 ACP1P24666 158 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 SLC25A1P53007 311 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 RPS11P62280 158 aaKnown RBP eCLIP13.38□□□□□ -0.27
PHF3-209ENST00000509330 ADAM8P78325 824 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 MYBPHQ13203 477 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 GPR50Q13585 617 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 PLPPR5Q32ZL2 321 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 MS4A18Q3C1V0 323 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 EEF1A1P5Q5VTE0 462 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 CARD17Q5XLA6 110 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 GPR139Q6DWJ6 353 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 LINC00346Q8IVM7 164 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 OR10AC1Q8NH08 325 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 COQ7Q99807 217 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 NDEL1Q9GZM8 345 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 SLCO1C1Q9NYB5 712 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 AKAP7Q9P0M2 348 aaPredicted RBP13.38□□□□□ -0.27
PHF3-209ENST00000509330 NPIPA1Q9UND3 350 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 CHCHD2Q9Y6H1 151 aaPredicted RBP13.38□□□□□ -0.27
PHF3-209ENST00000509330 CPAMD8Q8IZJ3 1885 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 OR2T1O43869 369 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 SNRPBP14678 240 aaKnown RBP13.38□□□□□ -0.27
PHF3-209ENST00000509330 EIF1AXP47813 144 aaKnown RBP13.38□□□□□ -0.27
PHF3-209ENST00000509330 NTRK2Q16620 822 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 DHRS13Q6UX07 377 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 SYS1Q8N2H4 156 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 ZNF248Q8NDW4 579 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 OR51A4Q8NGJ6 313 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 ST8SIA1Q92185 356 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 TTC9Q92623 222 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 TXNIPQ9H3M7 391 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 EXTL2Q9UBQ6 330 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 EXPH5Q8NEV8 1989 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 RAMP1O60894 148 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 IGF2P01344 180 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 KRT8P05787 483 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 CSF3P09919 207 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 MTNR1BP49286 362 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 CLDN12P56749 244 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 RPL22L1Q6P5R6 122 aaKnown RBP13.38□□□□□ -0.27
PHF3-209ENST00000509330 CORO6Q6QEF8 472 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 RGP1Q92546 391 aaPredicted RBP13.38□□□□□ -0.27
PHF3-209ENST00000509330 DDIT4LQ96D03 193 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 IMMP1LQ96LU5 166 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 PADI1Q9ULC6 663 aa13.38□□□□□ -0.27
PHF3-209ENST00000509330 CFAP47Q6ZTR5 3102 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 CNOT1A5YKK6 2376 aaKnown RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 ZNF814B7Z6K7 855 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 EIF1AYO14602 144 aaKnown RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 CDX4O14627 284 aaPredicted RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 FLRT2O43155 660 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 ONECUT2O95948 504 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 HTR3AP46098 478 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 DEFA1P59665 94 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 DEFA3P59666 94 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 GPR85P60893 370 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 IL10RAQ13651 578 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 TMEM176BQ3YBM2 270 aaPredicted RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 EMC4Q5J8M3 183 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 OR7E24Q6IFN5 339 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 CDC20BQ86Y33 519 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 OR5H6Q8NGV6 325 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 ZNF519Q8TB69 540 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 STK35Q8TDR2 534 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 WDFY2Q96P53 400 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 SIAEQ9HAT2 523 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 TBCCD1Q9NVR7 557 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 MRPL22Q9NWU5 206 aaKnown RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 FOXJ2Q9P0K8 574 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 MOKQ9UQ07 419 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 MRPS7Q9Y2R9 242 aaKnown RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 LAMA5O15230 3695 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 SLC22A23A1A5C7 686 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 OGG1O15527 345 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 EIF4EP06730 217 aaKnown RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 RAB3BP20337 219 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 APOBEC1P41238 236 aaKnown RBP13.37□□□□□ -0.27
PHF3-209ENST00000509330 PPP3R1P63098 170 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 HES5Q5TA89 166 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 MTFR2Q6P444 385 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 GLCCI1Q86VQ1 547 aa13.37□□□□□ -0.27
PHF3-209ENST00000509330 BPHLQ86WA6 291 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms