RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CHRDQ9H2X0 955 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 EXOSC3Q9NQT5 275 aaKnown RBP13.11□□□□□ -0.31
DDX41-208ENST00000507955 DOK2O60496 412 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 TCRBP04435 133 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 HLA-DOBP13765 273 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 CD53P19397 219 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 GIFP27352 417 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 MELKQ14680 651 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 MEP1BQ16820 701 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 PYHIN1Q6K0P9 492 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 AUNIPQ9H7T9 357 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 KCNG2Q9UJ96 466 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 HRH3Q9Y5N1 445 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 FREM3P0C091 2139 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 ZDBF2Q9HCK1 2354 aa13.11□□□□□ -0.31
DDX41-208ENST00000507955 ALG1L2C9J202 215 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 MEN1O00255 615 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 UPK3AO75631 287 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 HLA-DQA2P01906 255 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 BGLAPP02818 100 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 OPN1LWP04000 364 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 SLC35D3Q5M8T2 416 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 ZNF767PQ75MW2 155 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 ADGRG3Q86Y34 549 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 WDFY1Q8IWB7 410 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 SLC43A2Q8N370 569 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 BEST4Q8NFU0 473 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 HAVCR2Q8TDQ0 301 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 MAP6Q96JE9 813 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 PTDSS2Q9BVG9 487 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 APMAPQ9HDC9 416 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 WNT16Q9UBV4 365 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 ZNF222Q9UK12 451 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 MRTO4Q9UKD2 239 aaKnown RBP13.1□□□□□ -0.31
DDX41-208ENST00000507955 MGAT4AQ9UM21 535 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 SUSD5O60279 629 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 RPS15P62841 145 aaKnown RBP13.1□□□□□ -0.31
DDX41-208ENST00000507955 LCN10Q6JVE6 187 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 RFPL4BQ6ZWI9 263 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 LIPHQ8WWY8 451 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 GPR137Q96N19 417 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 LAMP5Q9UJQ1 280 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 VDAC3Q9Y277 283 aa13.1□□□□□ -0.31
DDX41-208ENST00000507955 TMED7-TICAM2A0A0A6YYA0 188 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 TRAV1-2A0A0B4J238 106 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 A0A1W2PQM1 296 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 LEUTXA8MZ59 168 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ZNF879B4DU55 563 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 SLC25A12O75746 678 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ARL6IP5O75915 188 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 SERPINA3P01011 423 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 RNF4P78317 190 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ACKR1Q16570 336 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 PWWP2BQ6NUJ5 590 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 LRRN1Q6UXK5 716 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 SLC16A9Q7RTY1 509 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 MDGA2Q7Z553 956 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 FAM109AQ8N4B1 249 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 OR8H1Q8NGG4 311 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 LRFN5Q96NI6 719 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 DPAGT1Q9H3H5 408 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 TEKT2Q9UIF3 430 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ZNF281Q9Y2X9 895 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 TMED7Q9Y3B3 224 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 H0YC42 278 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 MPZL1O95297 269 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 WNT11O96014 354 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 DHFRP00374 187 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 MT-ND4P03905 459 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 GP1BBP13224 206 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 STOMP27105 288 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 PLA2G7Q13093 441 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 BIKQ13323 160 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 INPP5JQ15735 1006 aaPredicted RBP13.09□□□□□ -0.31
DDX41-208ENST00000507955 COL28A1Q2UY09 1125 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ZBTB37Q5TC79 503 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 SLC6A19Q695T7 634 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 CMTM4Q8IZR5 234 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 TOMM5Q8N4H5 51 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 TEX19Q8NA77 164 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 APCDD1LQ8NCL9 501 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ZNF431Q8TF32 576 aaPredicted RBP13.09□□□□□ -0.31
DDX41-208ENST00000507955 SHDQ96IW2 340 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ARL5BQ96KC2 179 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 OR51J1Q9H342 316 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 NPFFR2Q9Y5X5 522 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 NUP210LQ5VU65 1888 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ADAM10O14672 748 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 FADS1O60427 444 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 PDGFBP01127 241 aaPredicted RBP13.09□□□□□ -0.31
DDX41-208ENST00000507955 MAS1P04201 325 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 PER3P56645 1201 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ST3GAL2Q16842 350 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 ISXQ2M1V0 245 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 FCRLAQ7L513 359 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 CDC20BQ86Y33 519 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 METTL21AQ8WXB1 218 aa13.09□□□□□ -0.31
DDX41-208ENST00000507955 CACNG6Q9BXT2 260 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms