RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 PGA3P0DJD8 388 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 PRKACGP22612 351 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 FPR3P25089 353 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 MPGP29372 298 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 DNAJA1P31689 397 aaKnown RBP5.02□□□□□ -1.61
USP46-206ENST00000506707 IFNGR2P38484 337 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 PEX19P40855 299 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 KIR2DL3P43628 341 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 BIDP55957 195 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 CTXN1P60606 82 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 GK3PQ14409 553 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 MELKQ14680 651 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 DAZAP2Q15038 168 aaPredicted RBP5.02□□□□□ -1.61
USP46-206ENST00000506707 ATP6AP1Q15904 470 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 GABRA6Q16445 453 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 RFX4Q33E94 735 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 C9orf135Q5VTT2 229 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 CARD17Q5XLA6 110 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 HMBOX1Q6NT76 420 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 CD300LDQ6UXZ3 194 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 FAM122BQ7Z309 247 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 AMIGO2Q86SJ2 522 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 IGFN1Q86VF2 1251 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 HS3ST5Q8IZT8 346 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 UBE2J2Q8N2K1 259 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 LINC00471Q8N535 108 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 ARIH2OSQ8N7S6 290 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 AQP11Q8NBQ7 271 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 GNPDA2Q8TDQ7 276 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 GIPC3Q8TF64 312 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 ASB10Q8WXI3 467 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 LRTOMTQ8WZ04 291 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 TMEM54Q969K7 222 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 NMD3Q96D46 503 aaKnown RBP5.02□□□□□ -1.61
USP46-206ENST00000506707 SLC25A44Q96H78 314 aaPredicted RBP5.02□□□□□ -1.61
USP46-206ENST00000506707 RSRC1Q96IZ7 334 aaKnown RBP5.02□□□□□ -1.61
USP46-206ENST00000506707 ADAD1Q96M93 576 aaKnown RBP5.02□□□□□ -1.61
USP46-206ENST00000506707 DACH2Q96NX9 599 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 GPX7Q96SL4 187 aaPredicted RBP5.02□□□□□ -1.61
USP46-206ENST00000506707 FEVQ99581 238 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 MDFIQ99750 246 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 NIPSNAP1Q9BPW8 284 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 DGCR6LQ9BY27 220 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 OR10A4Q9H209 315 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 TXNIPQ9H3M7 391 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 GPR35Q9HC97 309 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 KRCC1Q9NPI7 259 aaPredicted RBP5.02□□□□□ -1.61
USP46-206ENST00000506707 NRIP3Q9NQ35 241 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 TAS2R16Q9NYV7 291 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 IL20Q9NYY1 176 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 CRIM1Q9NZV1 1036 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 UPB1Q9UBR1 384 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 NDRG3Q9UGV2 375 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 IL20RAQ9UHF4 553 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 MGAT4BQ9UQ53 548 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 ADAM18Q9Y3Q7 739 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 BAHCC1Q9P281 2608 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 ARHGAP21Q5T5U3 1957 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 MED12LQ86YW9 2145 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 DOCK7Q96N67 2140 aa5.02□□□□□ -1.61
USP46-206ENST00000506707 IGKV1D-43A0A0B4J1Z2 117 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 SH3D21A4FU49 640 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 ARRDC5A6NEK1 342 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 OR5H1A6NKK0 313 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 M0R3G1 203 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 GNGT2O14610 69 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 ARPC3O15145 178 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 AKAP8O43823 692 aaKnown RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 ENTPD5O75356 428 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 DEAF1O75398 565 aaPredicted RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 KRT33AO76009 404 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 NDUFB2O95178 105 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 TXNDC12O95881 172 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 IGFBP1P08833 259 aaPredicted RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 PRF1P14222 555 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 COX6B1P14854 86 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 ACADSP16219 412 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 PPP3CBP16298 524 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 CDH2P19022 906 aaPredicted RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 FASP25445 335 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 RPL4P36578 427 aaKnown RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 DAP3P51398 398 aaKnown RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 ZNF133P52736 654 aaPredicted RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 RPL27P61353 136 aaKnown RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 ERVK-25P63136 954 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 ARF1P84077 181 aaKnown RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 ROR2Q01974 943 aaKnown RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 TGFBR3Q03167 851 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 COX10Q12887 443 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 TAF11Q15544 211 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 TAB1Q15750 504 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 CEACAM16Q2WEN9 425 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 TIMM23BQ5SRD1 257 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 ZNF362Q5T0B9 420 aaPredicted RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 OR7E24Q6IFN5 339 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 SHQ1Q6PI26 577 aaKnown RBP5.01□□□□□ -1.61
USP46-206ENST00000506707 SMARCD3Q6STE5 483 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 SEZ6L2Q6UXD5 910 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 DPY19L2P2Q6ZN68 376 aa5.01□□□□□ -1.61
USP46-206ENST00000506707 ZNF620Q6ZNG0 422 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms