RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	CPAMD8	Q8IZJ3	1885 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	IGLV3-12	A0A075B6K2	115 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	TRABD2B	A6NFA1	517 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203		A8MVM7	634 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203		K7ESF4	209 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	DHFR	P00374	187 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	ANKRD34C	P0C6C1	535 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	RPL27	P61353	136 aa	Known RBP	11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	RNF4	P78317	190 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	MAB21L1	Q13394	359 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	TNK1	Q13470	666 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	ACKR1	Q16570	336 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	PWWP2B	Q6NUJ5	590 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	FCRLA	Q7L513	359 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	TMPRSS9	Q7Z410	1059 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	GRINA	Q7Z429	371 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	LRRTM1	Q86UE6	522 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	IZUMO1	Q8IYV9	350 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	ZFAND1	Q8TCF1	268 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	STT3B	Q8TCJ2	826 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	METTL21A	Q8WXB1	218 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	SLC25A36	Q96CQ1	311 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	MRI1	Q9BV20	369 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	SEMA4C	Q9C0C4	833 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	PRO3102	Q9H379	93 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	SLA2	Q9H6Q3	261 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	AUNIP	Q9H7T9	357 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	LIN7B	Q9HAP6	207 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	PLEKHA1	Q9HB21	404 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	COPZ2	Q9P299	210 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	OR5V1	Q9UGF6	321 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	B9D1	Q9UPM9	204 aa		11.78	□□□□□ -0.52
MATR3-233	ENST00000504203	CACNA1E	Q15878	2313 aa		11.77	□□□□□ -0.52
MATR3-233	ENST00000504203	TRAV6	A0A075B6T7	132 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	TRBV5-7	A0A0A0MS05	114 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	PRSS37	A4D1T9	235 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	XKRY	O14609	159 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	PHYH	O14832	338 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	ZNF254	O75437	659 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	CALCB	P10092	127 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	GIF	P27352	417 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	CLDN12	P56749	244 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	INSM1	Q01101	510 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	WDR45B	Q5MNZ6	344 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	C1orf140	Q5VVS0	124 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	SHISA6	Q6ZSJ9	500 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	APCDD1L	Q8NCL9	501 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	DUSP19	Q8WTR2	217 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	THEM6	Q8WUY1	208 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	GTPBP2	Q9BX10	602 aa	Known RBP	11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	CACNG6	Q9BXT2	260 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	TXNIP	Q9H3M7	391 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	TCF7L1	Q9HCS4	588 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	SLCO1C1	Q9NYB5	712 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	TAS2R10	Q9NYW0	307 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	VSX1	Q9NZR4	365 aa	Predicted RBP	11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	KCNG2	Q9UJ96	466 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	SRPK3	Q9UPE1	567 aa		11.77	□□□□□ -0.53
MATR3-233	ENST00000504203	TMEM265	A0A087WTH1	108 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	IGHV3-20	A0A0C4DH32	117 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	TMEM212	A6NML5	194 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	TOX3	O15405	576 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	ZNF432	O94892	652 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	IGHM	P01871	453 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	RAF1	P04049	648 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	S100A1	P23297	94 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	GDNF	P39905	211 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	SOX2	P48431	317 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	MTFR2	Q6P444	385 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	FDX2	Q6P4F2	183 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	PRSS35	Q8N3Z0	413 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	SLC38A9	Q8NBW4	561 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	OR10AC1	Q8NH08	325 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	STK35	Q8TDR2	534 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	NSMAF	Q92636	917 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	ING1	Q9UK53	422 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	CACNA1C	Q13936	2221 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	IGLV1-36	A0A0B4J1U3	117 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203		A6NL46	340 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	PLPP3	O14495	311 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	ZNF354A	O60765	605 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	PLG	P00747	810 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	KIR3DL2	P43630	455 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	PTH2R	P49190	550 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	RAG2	P55895	527 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	SLC26A5	P58743	744 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	SNTB2	Q13425	540 aa	Known RBP	11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	SLC22A10	Q63ZE4	541 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	TMEM71	Q6P5X7	295 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	LRRC69	Q6ZNQ3	347 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	PLCZ1	Q86YW0	608 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	NFAM1	Q8NET5	270 aa	Predicted RBP	11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	C4orf45	Q96LM5	186 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	DCBLD2	Q96PD2	775 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	OR8B4	Q96RC9	309 aa		11.76	□□□□□ -0.53
MATR3-233	ENST00000504203	MESP1	Q9BRJ9	268 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms