RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF836Q6ZNA1 936 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 H1FNTQ75WM6 255 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 VRK2Q86Y07 508 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 ICA1LQ8NDH6 482 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 OR6N1Q8NGY5 312 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 GTF3AQ92664 365 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 ZDHHC16Q969W1 377 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 DIRC2Q96SL1 478 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 BCL2L14Q9BZR8 327 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 EGLN1Q9GZT9 426 aa13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 NOP53Q9NZM5 478 aaKnown RBP13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
PDLIM7-210ENST00000503827 IGHV3OR16-10A0A075B7F0 116 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 COPEO14579 308 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 RIPK2O43353 540 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 SPRY3O43610 288 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 NPHS1O60500 1241 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 FZD7O75084 574 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 SBK2P0C263 348 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 IGHV4-38-2P0DP08 117 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 SELEP16581 610 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 ARRB2P32121 409 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 UCP2P55851 309 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 TXNL4AP83876 142 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 FAM69AQ5T7M9 428 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 FIP1L1Q6UN15 594 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 PIWIL3Q7Z3Z3 882 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 SKA3Q8IX90 412 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 KLHL36Q8N4N3 616 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 PAQR4Q8N4S7 273 aaPredicted RBP13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 SPICQ8N5J4 248 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 OR52P1PQ8NH57 321 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 SLC30A2Q9BRI3 323 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 C1orf198Q9H425 327 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 PATZ1Q9HBE1 687 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 C1RLQ9NZP8 487 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 EGFL7Q9UHF1 273 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 GPR45Q9Y5Y3 372 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 NPTNQ9Y639 398 aa13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 KMT2CQ8NEZ4 4911 aaKnown RBP13.35□□□□□ -0.27
PDLIM7-210ENST00000503827 MDFIC2A0A1B0GVS7 189 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 ZNF726A6NNF4 738 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 SRRM5B3KS81 715 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 TM9SF1O15321 606 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 ENTPD5O75356 428 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 TSPAN15O95858 294 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 IGHV1-46P01743 117 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 IGHV3-13P01766 116 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 PPIAL4GP0DN37 164 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 CCL2P13500 99 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 PRG2P13727 222 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 NQO1P15559 274 aaKnown RBP13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 GRPRP30550 384 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 SLC6A9P48067 706 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 KRTAP10-3P60369 221 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 RELBQ01201 579 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 EMX2Q04743 252 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 PMS2P3Q13401 168 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 PDCD1Q15116 288 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 TBC1D28Q2M2D7 210 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 FAM205BPQ63HN1 556 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 C5orf46Q6UWT4 87 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 NET1Q7Z628 596 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 OR1J2Q8NGS2 313 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 FGFBP3Q8TAT2 258 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 FAM110DQ8TAY7 271 aaPredicted RBP13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 SLC38A4Q969I6 547 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 LRMDAQ9H2I8 198 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 NPHS2Q9NP85 383 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 TNFRSF19Q9NS68 423 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 ASIC5Q9NY37 505 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 OR5V1Q9UGF6 321 aa13.34□□□□□ -0.27
PDLIM7-210ENST00000503827 PLSCR5A0PG75 271 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 A8MXK9 166 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 C3orf80F5H4A9 247 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 MS4A18H0YCH9 400 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 ZNF500O60304 480 aaPredicted RBP13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 SNAP29O95721 258 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 PLATP00750 562 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 PTHP01270 115 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 IGHV2-70P01814 119 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 C1QCP02747 245 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 HLA-DOBP13765 273 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 CBLP22681 906 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 PAX8Q06710 450 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 CASP8Q14790 479 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 LARS2Q15031 903 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 MS4A18Q3C1V0 323 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 RNF220Q5VTB9 566 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 Q6ZPA2 131 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 LRRC34Q8IZ02 419 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 MIER2Q8N344 545 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 SLC22A24Q8N4F4 322 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 ADPRHL1Q8NDY3 354 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 TAAR8Q969N4 342 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 DCLRE1CQ96SD1 692 aaKnown RBP13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 ARMC7Q9H6L4 198 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 RNF121Q9H920 327 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 ZNF232Q9UNY5 417 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms