RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	CLCA1	A8K7I4	914 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	CENPBD1	B2RD01	187 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	DCTN6	O00399	190 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	AHCYL1	O43865	530 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	TRMU	O75648	421 aa	Known RBP	10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	SERPINI2	O75830	405 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.8	□□□□□ -0.68	3e-24	■■■■□ 21.7
MATR3-231	ENST00000502394	AQP8	O94778	261 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	ZNF432	O94892	652 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	ADRA2A	P08913	450 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	PGA4	P0DJD7	388 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	PGA3	P0DJD8	388 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	CLU	P10909	449 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	DBT	P11182	482 aa	Known RBP	10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	ZNF43	P17038	809 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	SPI1	P17947	270 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	ACVR2A	P27037	513 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	NTF4	P34130	210 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	DBP	Q10586	325 aa	Predicted RBP	10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	TMED1	Q13445	227 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	PON3	Q15166	354 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	KRTCAP3	Q53RY4	240 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	LINC01590	Q5TEZ4	76 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	C19orf48	Q6RUI8	117 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	MEPCE	Q7L2J0	689 aa	Known RBP	10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	GPAT4	Q86UL3	456 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	JAZF1	Q86VZ6	243 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	PM20D2	Q8IYS1	436 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	TMEM123	Q8N131	208 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	GHDC	Q8N2G8	530 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	FAR1	Q8WVX9	515 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	ZNRF4	Q8WWF5	429 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	ADAD1	Q96M93	576 aa	Known RBP	10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	ZNF385A	Q96PM9	386 aa	Known RBP	10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	ALG12	Q9BV10	488 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	AMBN	Q9NP70	447 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	HAO2	Q9NYQ3	351 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	BLOC1S6	Q9UL45	172 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	CAMK2A	Q9UQM7	478 aa		10.8	□□□□□ -0.68
MATR3-231	ENST00000502394	IGLV1-36	A0A0B4J1U3	117 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	SLC35F4	A4IF30	521 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	NPIPA2	E9PIF3	369 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	NPIPA3	F8WFD2	350 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394		H7C1C5	153 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394		M0R3G1	203 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	ERVH48-1	M5A8F1	160 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	ARHGEF9	O43307	516 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	FAM20B	O75063	409 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	SYNGR4	O95473	234 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	PAICS	P22234	425 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	ZNF133	P52736	654 aa	Predicted RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	CDH11	P55287	796 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	BID	P55957	195 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	CLDN17	P56750	224 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	LCN6	P62502	163 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	RASGEF1B	Q0VAM2	473 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	KLRB1	Q12918	225 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	C1D	Q13901	141 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	GGTLC2	Q14390	218 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	HIST3H3	Q16695	136 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	SLC35D3	Q5M8T2	416 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	EEF1A1P5	Q5VTE0	462 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	B3GNT6	Q6ZMB0	384 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	HDDC2	Q7Z4H3	204 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	ZBTB46	Q86UZ6	589 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	CISD2	Q8N5K1	135 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	TEX19	Q8NA77	164 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	NOXO1	Q8NFA2	376 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	OR9Q1	Q8NGQ5	310 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	FNDC9	Q8TBE3	224 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	ABHD3	Q8WU67	409 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	IPCEF1	Q8WWN9	437 aa	Predicted RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	RFK	Q969G6	155 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	TMEM45B	Q96B21	275 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	SNRNP40	Q96DI7	357 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	WBP1	Q96G27	269 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	SLC25A44	Q96H78	314 aa	Predicted RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	OR2M2	Q96R28	347 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	TEAD3	Q99594	435 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	EMC6	Q9BV81	110 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	SYT4	Q9H2B2	425 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	BCO1	Q9HAY6	547 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	ASB6	Q9NWX5	421 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	SCN3B	Q9NY72	215 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	MCTS1	Q9ULC4	181 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	10.79	□□□□□ -0.68	3e-10	■■□□□ 12.3
MATR3-231	ENST00000502394	RCE1	Q9Y256	329 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	EXOG	Q9Y2C4	368 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	TPRKB	Q9Y3C4	175 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	RPL36	Q9Y3U8	105 aa	Known RBP	10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	FKBP7	Q9Y680	259 aa		10.79	□□□□□ -0.68
MATR3-231	ENST00000502394	MAP1B	P46821	2468 aa	Known RBP	10.78	□□□□□ -0.68
MATR3-231	ENST00000502394	IGKV1D-43	A0A0B4J1Z2	117 aa		10.78	□□□□□ -0.68
MATR3-231	ENST00000502394	EFCAB10	A6NFE3	127 aa		10.78	□□□□□ -0.68
MATR3-231	ENST00000502394	SLC22A31	A6NKX4	558 aa		10.78	□□□□□ -0.68
MATR3-231	ENST00000502394	ZNF724	A8MTY0	619 aa		10.78	□□□□□ -0.68
MATR3-231	ENST00000502394		J3QRE1	110 aa		10.78	□□□□□ -0.68
MATR3-231	ENST00000502394	XKRY	O14609	159 aa		10.78	□□□□□ -0.68
MATR3-231	ENST00000502394	ZNHIT1	O43257	154 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms