RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 HIST1H2ACQ93077 130 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 HAVCR1Q96D42 359 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 KLHL15Q96M94 604 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 FOXN4Q96NZ1 517 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 INTS14Q96SY0 518 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 IRF2BPLQ9H1B7 796 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 C12orf10Q9HB07 376 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 SLC2A4RGQ9NR83 387 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 MRPL39Q9NYK5 338 aaKnown RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 RABL2AQ9UBK7 228 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 KCNG2Q9UJ96 466 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 MRTO4Q9UKD2 239 aaKnown RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 RABL2BQ9UNT1 228 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 FKBP7Q9Y680 259 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 RNF215Q9Y6U7 377 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 TCRBV16S1A1N1A0A5B0 115 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 METTL12A8MUP2 240 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 H0YC42 278 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 SSNA1O43805 119 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 TSPAN2O60636 221 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF217O75362 1048 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF254O75437 659 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 NUDT14O95848 222 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 MAS1P04201 325 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 CXCR1P25024 350 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 SLC6A8P48029 635 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 VEGFCP49767 419 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 OR1D5P58170 312 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ELAVL1Q15717 326 aaKnown RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 C14orf28Q4W4Y0 310 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 FAM69AQ5T7M9 428 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 GPR139Q6DWJ6 353 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF782Q6ZMW2 699 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 NUP54Q7Z3B4 507 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 TMPRSS12Q86WS5 348 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 OR8K3Q8NH51 312 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 OR1L3Q8NH93 324 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 C1orf216Q8TAB5 229 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 FCAMRQ8WWV6 532 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 NSMAFQ92636 917 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 HGDQ93099 445 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 RELTQ969Z4 430 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 TMEM106AQ96A25 262 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 MIB2Q96AX9 1013 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 S100A16Q96FQ6 103 aaKnown RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ZDHHC12Q96GR4 267 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 PTDSS2Q9BVG9 487 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ACTR6Q9GZN1 396 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 SLITRK2Q9H156 845 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF275Q9NSD4 429 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-204ENST00000501271 FREM3P0C091 2139 aa8.92□□□□□ -0.98
CLIP1-204ENST00000501271 ADAMTS20P59510 1910 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 TRBV5-7A0A0A0MS05 114 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 RHPN2P1A8MT19 583 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 LMO7DNF2Z398 122 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 NDUFB5O43674 189 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 TMEM127O75204 238 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 KHDRBS3O75525 346 aaKnown RBP8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ECDO95905 644 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-204ENST00000501271 RAB40ALP0C0E4 278 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 PSMB1P20618 241 aaKnown RBP8.91□□□□□ -0.98
CLIP1-204ENST00000501271 DCTDP32321 178 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 KIR3DL2P43630 455 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 SELENOPP49908 381 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ART1P52961 327 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 TAS2R20P59543 309 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 RPL6Q02878 288 aaKnown RBP8.91□□□□□ -0.98
CLIP1-204ENST00000501271 CFHR1Q03591 330 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 EGR3Q06889 387 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 PLCXD2Q0VAA5 305 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 COL19A1Q14993 1142 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 Q6ZTK2 550 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 LUZP2Q86TE4 346 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ZNF676Q8N7Q3 588 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 RAB40AQ8WXH6 277 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 SLC25A36Q96CQ1 311 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 MSANTD3Q96H12 275 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 CITED4Q96RK1 184 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 RAB33BQ9H082 229 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 OR10A4Q9H209 315 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 LMAN1LQ9HAT1 526 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 DLL4Q9NR61 685 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 AKAP7Q9P0M2 348 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-204ENST00000501271 MTCH2Q9Y6C9 303 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 SDK1Q7Z5N4 2213 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 TRAV36DV7A0A075B6V5 113 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ANKRD20A5PA0PJZ0 165 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 TMEM212A6NML5 194 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ANXA2P2A6NMY6 339 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ALG1L2C9J202 215 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 G3V3Q6 166 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ARPC1BO15143 372 aaKnown RBP8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ANXA2P07355 339 aaKnown RBP8.91□□□□□ -0.98
CLIP1-204ENST00000501271 CSRP1P21291 193 aaKnown RBP8.91□□□□□ -0.98
CLIP1-204ENST00000501271 PER3P56645 1201 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 HSD11B2P80365 405 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 CAMK2DQ13557 499 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 NSDHLQ15738 373 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 WDR38Q5JTN6 314 aa8.91□□□□□ -0.98
CLIP1-204ENST00000501271 ELFN2Q5R3F8 820 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms