RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CDC42EP2O14613 210 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 IDH3BO43837 385 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 OR2T1O43869 369 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 NOL3O60936 208 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 ENTPD6O75354 484 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 OR7A10O76100 309 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 NDUFB2O95178 105 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 IFNGP01579 166 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 SERPINA7P05543 415 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 CDK1P06493 297 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 HNRNPCP07910 306 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 IGFBP1P08833 259 aaPredicted RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 PIPP12273 146 aaPredicted RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 HK1P19367 917 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 FKBP2P26885 142 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 TACR3P29371 465 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 APOBEC1P41238 236 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 POLR2HP52434 150 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 MAP2K6P52564 334 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 MLF1P58340 268 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 PRPS1P60891 318 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 RPS18P62269 152 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 CHAF1BQ13112 559 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 QPRTQ15274 297 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 PGGHGQ32M88 737 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF791Q3KP31 576 aaPredicted RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC22A10Q63ZE4 541 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 H3F3CQ6NXT2 135 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 TMEM81Q6P7N7 255 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 CBLN3Q6UW01 205 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 IL20RBQ6UXL0 311 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 WDR88Q6ZMY6 472 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 Q6ZNX1 250 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 C16orf47Q6ZP98 133 aaPredicted RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 AHSA2Q719I0 299 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 SPATC1Q76KD6 591 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 RHOUQ7L0Q8 258 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 GRINAQ7Z429 371 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 PPP1R32Q7Z5V6 425 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 MEX3DQ86XN8 651 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 MCEMP1Q8IX19 187 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 GPALPP1Q8IXQ4 340 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 LNX2Q8N448 690 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 IQCF1Q8N6M8 205 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 C10orf53Q8N6V4 93 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 OR5M3Q8NGP4 307 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 OR51A7Q8NH64 312 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF420Q8TAQ5 688 aaPredicted RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 FANK1Q8TC84 345 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 RNF138Q8WVD3 245 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 APH1BQ8WW43 257 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 LIPHQ8WWY8 451 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 FCGR1BQ92637 280 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 RORBQ92753 470 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 BORCS5Q969J3 196 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 KIAA1143Q96AT1 154 aaPredicted RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 SGCZQ96LD1 299 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 SAMD8Q96LT4 415 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 FER1L6-AS2Q96M78 137 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 TNFRSF13CQ96RJ3 184 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 IL4I1Q96RQ9 567 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 IFT27Q9BW83 186 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 FN3KQ9H479 309 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 NANSQ9NR45 359 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 SERINC1Q9NRX5 453 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 C20orf141Q9NUB4 165 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 P4HTMQ9NXG6 502 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 FOXJ2Q9P0K8 574 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 ERVK-18Q9QC07 812 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 AASSQ9UDR5 926 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 TEKT2Q9UIF3 430 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 KLHL21Q9UJP4 597 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 FBXL4Q9UKA2 621 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC6A5Q9Y345 797 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 TMED7Q9Y3B3 224 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF337Q9Y3M9 751 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 SPIN1Q9Y657 262 aaPredicted RBP4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 ATP23Q9Y6H3 246 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 CEPT1Q9Y6K0 416 aa4.77□□□□□ -1.65
HMGXB4-208ENST00000498325 TRAV36DV7A0A075B6V5 113 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 A0A087WZY1 265 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 IGLV3-32A0A0A0MS00 114 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 LOC101059948A0A1B0GTJ6 334 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 RIIAD1A6NNX1 92 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 KDM4EB2RXH2 506 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PRR23D1E9PI22 279 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 H3BSA7 217 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 IMPA2O14732 288 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 SURF4O15260 269 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PRODHO43272 600 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PRKYO43930 277 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 GMFGO60234 142 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF354AO60765 605 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 AHSA1O95433 338 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 NTN1O95631 604 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 CH25HO95992 272 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 MT-ATP6P00846 226 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms