RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ANKK1Q8NFD2 765 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 PFN4Q8NHR9 129 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 MOGAT1Q96PD6 335 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 DHRS9Q9BPW9 319 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 ZNF426Q9BUY5 554 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 SLC19A3Q9BZV2 496 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 GSX1Q9H4S2 264 aaPredicted RBP13.41□□□□□ -0.26
NUP50-219ENST00000497960 NMNAT1Q9HAN9 279 aaPredicted RBP13.41□□□□□ -0.26
NUP50-219ENST00000497960 NOX1Q9Y5S8 564 aa13.41□□□□□ -0.26
NUP50-219ENST00000497960 CSPG4Q6UVK1 2322 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 A0A1W2PRQ8 180 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 FAM171A2A8MVW0 826 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 RPL36A-HNRNPH2H7BZ11 118 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 H7C1Q1 480 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 TRAF3IP2O43734 574 aaPredicted RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 FKBP6O75344 327 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 OR6A2O95222 327 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 HPRP00739 348 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 HOXB1P14653 301 aaPredicted RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 POU3F1Q03052 451 aaPredicted RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 SPOCK1Q08629 439 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 DGCR6Q14129 220 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 IQCCQ4KMZ1 466 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 LINGO2Q7L985 606 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 RRM2BQ7LG56 351 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 DTX2Q86UW9 622 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 FBXL14Q8N1E6 418 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 OR5J2Q8NH18 312 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 OR52J3Q8NH60 311 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 MAGEE2Q8TD90 523 aaPredicted RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 ACOT11Q8WXI4 607 aaPredicted RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 BCL2L2Q92843 193 aaPredicted RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 DHRS1Q96LJ7 313 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 OR2M2Q96R28 347 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 KCNS3Q9BQ31 491 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 TRAF4Q9BUZ4 470 aaPredicted RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 CHID1Q9BWS9 393 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 GRIP2Q9C0E4 1043 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 MOV10Q9HCE1 1003 aaKnown RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 KRCC1Q9NPI7 259 aaPredicted RBP13.4□□□□□ -0.26
NUP50-219ENST00000497960 ATP23Q9Y6H3 246 aa13.4□□□□□ -0.26
NUP50-219ENST00000497960 A0A096LPE4 126 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 TRBV4-1A0A0J9YWV2 114 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 A0A1W2PPZ6 126 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 ZNF726A6NNF4 738 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 E7EQL1 145 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 LRRN3E7EW58 273 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 PLPP3O14495 311 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 CH25HO95992 272 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 CST1P01037 141 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 HIST1H2ABP04908 130 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 ADORA3P0DMS8 318 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 IFI30P13284 250 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 HLA-DOBP13765 273 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 FUT4P22083 530 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 TTKP33981 857 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 CDKN1AP38936 164 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 FABP6P51161 128 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 ARF1P84077 181 aaKnown RBP13.39□□□□□ -0.27
NUP50-219ENST00000497960 ETFDHQ16134 617 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 CARD17Q5XLA6 110 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 OR2T5Q6IEZ7 315 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 HIST3H2AQ7L7L0 130 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 PXKQ7Z7A4 578 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 NRMQ8IXM6 262 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 OR2T29Q8NH02 315 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 SLC7A13Q8TCU3 470 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 HIST1H2ACQ93077 130 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 SGTBQ96EQ0 304 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 COX4I2Q96KJ9 171 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 REEP1Q9H902 201 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 CRLF2Q9HC73 371 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 B3GAT2Q9NPZ5 323 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 MEPEQ9NQ76 525 aaPredicted RBP13.39□□□□□ -0.27
NUP50-219ENST00000497960 NANSQ9NR45 359 aa13.39□□□□□ -0.27
NUP50-219ENST00000497960 A0A087WUU8 490 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 ARPC4-TTLL3A0A0A6YYG9 625 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 TRIM64A6NGJ6 449 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 TRIM64BA6NI03 449 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 C11orf98E9PRG8 122 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 M0R3G1 203 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 TNFRSF11BO00300 401 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 GNGT2O14610 69 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 SMAD7O15105 426 aaKnown RBP13.38□□□□□ -0.27
NUP50-219ENST00000497960 SERPINI2O75830 405 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 CD8AP01732 235 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 ACTR3P61158 418 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 ZNF74Q16587 644 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 CEACAM16Q2WEN9 425 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 ZNF544Q6NX49 715 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 PODNL1Q6PEZ8 512 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 MBOAT2Q6ZWT7 520 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 SLC46A3Q7Z3Q1 461 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 NANOGNBQ7Z5D8 188 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 C20orf196Q8IYI0 205 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 TMEM123Q8N131 208 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 MUC15Q8N387 334 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 OR6N1Q8NGY5 312 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 TXNDC15Q96J42 360 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms