RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 GLTPQ9NZD2 209 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 SPRR3Q9UBC9 169 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 COL27A1Q8IZC6 1860 aaPredicted RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 EI24O14681 340 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 BGLAPP02818 100 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 HMGA2P52926 109 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 NR1H2P55055 460 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 ACTC1P68032 377 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 ACTA1P68133 377 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 POU4F3Q15319 338 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 IGFBP7Q16270 282 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 TMEM108Q6UXF1 575 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 CCDC71Q8IV32 467 aaPredicted RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 SIAH3Q8IW03 269 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 OR9Q2Q8NGE9 314 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 POC1BQ8TC44 478 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 RNF138Q8WVD3 245 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 TMEM45BQ96B21 275 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 PKP2Q99959 881 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 GMPR2Q9P2T1 348 aaKnown RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 HIF3AQ9Y2N7 669 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 FKBP7Q9Y680 259 aa7.7□□□□□ -1.18
U2AF1-212ENST00000496462 DIDO1Q9BTC0 2240 aaKnown RBP7.7□□□□□ -1.18
U2AF1-212ENST00000496462 TEX13CA0A0J9YWL9 993 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 TCRBV5S2A0A599 114 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 MBD3L4A6NDZ8 208 aaPredicted RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 MBD3L3A6NE82 208 aaPredicted RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 MBD3L5A6NJ08 208 aaPredicted RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 SLC16A7O60669 478 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 FZD7O75084 574 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 KRT8P05787 483 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 PLA2G2AP14555 144 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 GCH1P30793 250 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ROR2Q01974 943 aaKnown RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 WFDC8Q8IUA0 241 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 MBD3L2Q8NHZ7 208 aaPredicted RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 HIST1H2AAQ96QV6 131 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ELOVL3Q9HB03 270 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 CENPMQ9NSP4 180 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 NKIRAS2Q9NYR9 191 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 A0A1W2PNV4 684 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 TMEM229AB2RXF0 380 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 MYL12BO14950 172 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 CD8BP10966 210 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 MSR1P21757 451 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 CDH11P55287 796 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 MZT1Q08AG7 82 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 PPP1R8Q12972 351 aaKnown RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 NPRL3Q12980 569 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 LAPTM4AQ15012 233 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 IQCCQ4KMZ1 466 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 KRT77Q7Z794 578 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 CCDC103Q8IW40 242 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 PARP8Q8N3A8 854 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 FTMTQ8N4E7 242 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 SVOPQ8N4V2 548 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 NOXO1Q8NFA2 376 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 RNF128Q8TEB7 428 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 HSD17B8Q92506 261 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ARPC3O15145 178 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 QDPRP09417 244 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 GLI4P10075 376 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 KIR2DL3P43628 341 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 OR3A2P47893 321 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 GIPRP48546 466 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 TMED1Q13445 227 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 TBC1D28Q2M2D7 210 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 SLC18B1Q6NT16 456 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 TBPL2Q6SJ96 375 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 PLEKHG7Q6ZR37 379 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 C17orf78Q8N4C9 275 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ZNF454Q8N9F8 522 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 LRR1Q96L50 414 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 USE1Q9NZ43 259 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 LAMP5Q9UJQ1 280 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 NAV2Q8IVL1 2488 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 NPIPB13A6NJU9 1138 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 NPIPB4C9JG80 1138 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ETV2O00321 342 aaPredicted RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 SS18L1O75177 396 aaPredicted RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ATP6V1G2O95670 118 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 NUDT6P53370 316 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 TPTEP56180 551 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 PRR30Q53SZ7 412 aaPredicted RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 SLC35D3Q5M8T2 416 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ZNF620Q6ZNG0 422 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 Q6ZPB1 254 aaPredicted RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 CREB3L2Q70SY1 520 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 OR6N2Q8NGY6 317 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ABHD3Q8WU67 409 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 NTNG2Q96CW9 530 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 PITX2Q99697 317 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 FN3KQ9H479 309 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 PLSCR2Q9NRY7 297 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 ZNF346Q9UL40 294 aaKnown RBP7.69□□□□□ -1.18
U2AF1-212ENST00000496462 TIMM10BQ9Y5J6 103 aa7.69□□□□□ -1.18
U2AF1-212ENST00000496462 TLX2O43763 284 aaPredicted RBP7.68□□□□□ -1.18
U2AF1-212ENST00000496462 PIP5K1CO60331 668 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 SPARCP09486 303 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 PRKACGP22612 351 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms