RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 MOB1BQ7L9L4 216 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 SSX9Q7RTT3 188 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 RANBP3LQ86VV4 465 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-212ENST00000496458 TGIF2LYQ8IUE0 185 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 CD300LFQ8TDQ1 290 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 DDI1Q8WTU0 396 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 FAM3CQ92520 227 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 ELMO1Q92556 727 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 RAB1CQ92928 201 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 OPTNQ96CV9 577 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 KCNS3Q9BQ31 491 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 DPH7Q9BTV6 452 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 IL22Q9GZX6 179 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 ALG9Q9H6U8 611 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 CD300AQ9UGN4 299 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 PURGQ9UJV8 347 aaKnown RBP3.76□□□□□ -1.81
SF3B1-212ENST00000496458 VANGL2Q9ULK5 521 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 PRELID1Q9Y255 219 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 RHBDD3Q9Y3P4 386 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 PPIAL4AQ9Y536 164 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 LRRC37A3O60309 1634 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 TNS2Q63HR2 1409 aa3.76□□□□□ -1.81
SF3B1-212ENST00000496458 GOLGB1Q14789 3259 aaKnown RBP3.75□□□□□ -1.81
SF3B1-212ENST00000496458 GAKO14976 1311 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 SH3TC1Q8TE82 1336 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 PCDH11XQ9BZA7 1347 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 ITGB4P16144 1822 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 A0A1B0GUH1 482 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 TUBAL3A6NHL2 446 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 WASHC1A8K0Z3 465 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 HIP1O00291 1037 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 LSM1O15116 133 aaKnown RBP3.75□□□□□ -1.81
SF3B1-212ENST00000496458 TPST2O60704 377 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 CBR3O75828 277 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 OR2F2O95006 317 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 MBP02144 154 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 POU2F1P14859 743 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 NCK1P16333 377 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 SYT1P21579 422 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 CASP14P31944 242 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 SPAM1P38567 509 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 GPR4P46093 362 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 CASP4P49662 377 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 CCNG1P51959 295 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 PLA2G16P53816 162 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 UBE2IP63279 158 aaKnown RBP3.75□□□□□ -1.81
SF3B1-212ENST00000496458 PUDPQ08623 228 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 IL18R1Q13478 541 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 BCL2A1Q16548 175 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 MICBQ29980 383 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 GGTA1PQ4G0N0 100 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 SFT2D3Q587I9 215 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 LIPNQ5VXI9 398 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 CLEC6AQ6EIG7 209 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 OR2A2Q6IF42 318 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 DPY19L2P2Q6ZN68 376 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 GPBP1Q86WP2 473 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 FAM58AQ8N1B3 248 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 ALLCQ8N6M5 410 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 PQLC3Q8N755 202 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 OR51G2Q8NGK0 314 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 OR1L4Q8NGR5 311 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 DLX4Q92988 240 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-212ENST00000496458 SLC38A4Q969I6 547 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 SLC25A38Q96DW6 304 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 AMDHD1Q96NU7 426 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 TRNT1Q96Q11 434 aaKnown RBP3.75□□□□□ -1.81
SF3B1-212ENST00000496458 TM2D1Q9BX74 207 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 TSSK1BQ9BXA7 367 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 POLD4Q9HCU8 107 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 MRPS30Q9NP92 439 aaKnown RBP3.75□□□□□ -1.81
SF3B1-212ENST00000496458 STARD5Q9NSY2 213 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 STX18Q9P2W9 335 aaKnown RBP3.75□□□□□ -1.81
SF3B1-212ENST00000496458 CSDC2Q9Y534 153 aaKnown RBP3.75□□□□□ -1.81
SF3B1-212ENST00000496458 RGPD1P0DJD0 1748 aa3.75□□□□□ -1.81
SF3B1-212ENST00000496458 TRAV6A0A075B6T7 132 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 TRBV11-1A0A0K0K1C0 115 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 SMCO3A2RU48 225 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 LRIT2A6NDA9 550 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 LRRC30A6NM36 301 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 LRRIQ3A6PVS8 624 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 RSPH10B2B2RC85 870 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 H3BQF6 201 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 PANO1I0J062 215 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 NDUFAB1O14561 156 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 SMIM24O75264 130 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 H6PDO95479 791 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 IGSF6O95976 241 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 IGLV1-47P01700 117 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 RSPH10BP0C881 870 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 POLR2EP19388 210 aaKnown RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 ALDH3A1P30838 453 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 SGSHP51688 502 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 MRPS25P82663 173 aaKnown RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 SPCS2Q15005 226 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 STK38Q15208 465 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 USF2Q15853 346 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-212ENST00000496458 KYAT1Q16773 422 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 WHAMMP3Q1A5X7 153 aa3.74□□□□□ -1.81
SF3B1-212ENST00000496458 ZNF699Q32M78 642 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms