RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	SEMG1	P04279	462 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	H1F0	P07305	194 aa	Known RBP	10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	AQP2	P41181	271 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	CSNK1A1	P48729	337 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	SLC9A3	P48764	834 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	DAP3	P51398	398 aa	Known RBP	10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	SMIM11A	P58511	58 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	RPS4X	P62701	263 aa	Known RBP	10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	FOXD4	Q12950	439 aa	Predicted RBP	10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	CAMK2D	Q13557	499 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	TAF11	Q15544	211 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	ZNF672	Q499Z4	452 aa	Predicted RBP	10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	MTX3	Q5HYI7	312 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	PHYHD1	Q5SRE7	291 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	CARD17	Q5XLA6	110 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	TMPRSS11F	Q6ZWK6	438 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	TRPM8	Q7Z2W7	1104 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	NRM	Q8IXM6	262 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	LRRC75A-AS1	Q8N1F1	130 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	FAM86B1	Q8N7N1	296 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	IGFBPL1	Q8WX77	278 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	TMEM54	Q969K7	222 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	FBXW5	Q969U6	566 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	MCUR1	Q96AQ8	359 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	ZNF837	Q96EG3	531 aa	Predicted RBP	10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	SEPHS2	Q99611	448 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	CCL19	Q99731	98 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	ULBP2	Q9BZM5	246 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	INIP	Q9NRY2	104 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	GLTP	Q9NZD2	209 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	ACTR3B	Q9P1U1	418 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	PRPF19	Q9UMS4	504 aa	Known RBP	10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	TMEM5	Q9Y2B1	443 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	FREM1	Q5H8C1	2179 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	CCDC168	Q8NDH2	2452 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	ABCA4	P78363	2273 aa		10.81	□□□□□ -0.68
MRPL55-233	ENST00000495899	EFCAB9	A8MZ26	197 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	SHISA9	B4DS77	424 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899		M0R1B8	84 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	PIP5K1C	O60331	668 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	ENTPD5	O75356	428 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	IGHG1	P01857	330 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	F13B	P05160	661 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	PGA4	P0DJD7	388 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	PGA3	P0DJD8	388 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	SAG	P10523	405 aa	Predicted RBP	10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	PAX1	P15863	534 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	MAK	P20794	623 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	FUT4	P22083	530 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	VLDLR	P98155	873 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	TRIM25	Q14258	630 aa	Known RBP	10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	HIST3H3	Q16695	136 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	IQCC	Q4KMZ1	466 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	ALG10	Q5BKT4	473 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	TBPL2	Q6SJ96	375 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	RINL	Q6ZS11	566 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	PIWIL3	Q7Z3Z3	882 aa	Known RBP	10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	OAF	Q86UD1	273 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	LURAP1L	Q8IV03	231 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	SLC7A13	Q8TCU3	470 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	SMAP2	Q8WU79	429 aa	Predicted RBP	10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	DHRS1	Q96LJ7	313 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	ZNF347	Q96SE7	839 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	C1QTNF6	Q9BXI9	259 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	MRPL13	Q9BYD1	178 aa	Known RBP	10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	NELFA	Q9H3P2	528 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	IL1RAP	Q9NPH3	570 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	FAIM	Q9NVQ4	179 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	TAS2R1	Q9NYW7	299 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	CISD1	Q9NZ45	108 aa	Known RBP	10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	CRNN	Q9UBG3	495 aa	Predicted RBP	10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899	POFUT2	Q9Y2G5	429 aa		10.8	□□□□□ -0.68
MRPL55-233	ENST00000495899		A0A096LPE4	126 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899		A0A1W2PPZ6	126 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	hCG_2039718	K7EN88	272 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	MGRN1	O60291	552 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	SMPD2	O60906	423 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	FABP3	P05413	133 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	DANCR	P0C864	163 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	NR2C1	P13056	603 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	CBR1	P16152	277 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	ARR3	P36575	388 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	ARMC4	Q5T2S8	1044 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	PODNL1	Q6PEZ8	512 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	SLC22A25	Q6T423	547 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	WDFY1	Q8IWB7	410 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	KBTBD8	Q8NFY9	601 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	MOSPD2	Q8NHP6	518 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	TMEM171	Q8WVE6	324 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	ASB10	Q8WXI3	467 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	TXNIP	Q9H3M7	391 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	CXorf56	Q9H5V9	222 aa		10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL55-233	ENST00000495899	MCIDAS	D6RGH6	385 aa		10.78	□□□□□ -0.68
MRPL55-233	ENST00000495899	ARHGEF9	O43307	516 aa		10.78	□□□□□ -0.68
MRPL55-233	ENST00000495899	DHH	O43323	396 aa		10.78	□□□□□ -0.68
MRPL55-233	ENST00000495899	IGKV3-15	P01624	115 aa		10.78	□□□□□ -0.68
MRPL55-233	ENST00000495899	IGLV1-44	P01699	117 aa		10.78	□□□□□ -0.68
MRPL55-233	ENST00000495899	IGHM	P01871	453 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms