RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 HGFACQ04756 655 aa21■□□□□ 0.95
HLA-C-209ENST00000495835 LOXL1Q08397 574 aaPredicted RBP21■□□□□ 0.95
HLA-C-209ENST00000495835 DEF8Q6ZN54 512 aa21■□□□□ 0.95
HLA-C-209ENST00000495835 NKAIN4Q8IVV8 208 aa21■□□□□ 0.95
HLA-C-209ENST00000495835 WDFY1Q8IWB7 410 aa21■□□□□ 0.95
HLA-C-209ENST00000495835 EFCAB1Q9HAE3 211 aa21■□□□□ 0.95
HLA-C-209ENST00000495835 ARMCX1Q9P291 453 aa21■□□□□ 0.95
HLA-C-209ENST00000495835 STX18Q9P2W9 335 aaKnown RBP21■□□□□ 0.95
HLA-C-209ENST00000495835 ABCA1O95477 2261 aa21■□□□□ 0.95
HLA-C-209ENST00000495835 A0A096LNT2 108 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 BLOC1S5-TXNDC5H3BN57 136 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 OR7A10O76100 309 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 CELA3BP08861 270 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 TSPAN19P0C672 248 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 COX4I1P13073 169 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 FUT1P19526 365 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 PPOXP50336 477 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 ST3GAL3Q11203 375 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 NPRL3Q12980 569 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 PIN1Q13526 163 aaPredicted RBP20.99■□□□□ 0.95
HLA-C-209ENST00000495835 NRN1LQ496H8 165 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 LRRC23Q53EV4 343 aaPredicted RBP20.99■□□□□ 0.95
HLA-C-209ENST00000495835 DPPA2Q7Z7J5 298 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 ZNF525Q8N782 197 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 MAPK1IP1LQ8NDC0 245 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 C10orf105Q8TEF2 133 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 SGTBQ96EQ0 304 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 ZNF75AQ96N20 296 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 SEC61A2Q9H9S3 476 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 MED31Q9Y3C7 131 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 SPEF1Q9Y4P9 236 aa20.99■□□□□ 0.95
HLA-C-209ENST00000495835 A0A1W2PRG6 482 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 NPIPB13A6NJU9 1138 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 NPIPB4C9JG80 1138 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 SEC14L2O76054 403 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 HLA-HP01893 362 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 PGA4P0DJD7 388 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 PGA3P0DJD8 388 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 CD79AP11912 226 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 ZNF14P17017 642 aaPredicted RBP20.98■□□□□ 0.95
HLA-C-209ENST00000495835 TNFRSF1BP20333 461 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 NPR2P20594 1047 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 OR1E2P47887 323 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 UGT2B15P54855 530 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 RAB1AP62820 205 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 HIST3H3Q16695 136 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 HACD2Q6Y1H2 254 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 MYPOPQ86VE0 399 aaPredicted RBP20.98■□□□□ 0.95
HLA-C-209ENST00000495835 SLC15A3Q8IY34 581 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 TMEM255BQ8WV15 326 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 TNFRSF13CQ96RJ3 184 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 CMTM6Q9NX76 183 aa20.98■□□□□ 0.95
HLA-C-209ENST00000495835 DHHO43323 396 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 CRLF1O75462 422 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 RAB36O95755 333 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 IGHG1P01857 330 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 OR8G3PP0DMU2 310 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 B4GALT1P15291 398 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 NR4A1P22736 598 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 THBS4P35443 961 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 EVX1P49640 407 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 RPL18Q07020 188 aaKnown RBP20.97■□□□□ 0.95
HLA-C-209ENST00000495835 DAG1Q14118 895 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 LRFN4Q6PJG9 635 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 POU5F2Q8N7G0 328 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 TPD52L3Q96J77 140 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 PRRC1Q96M27 445 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 SEPHS2Q99611 448 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 RAB1BQ9H0U4 201 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 NOX3Q9HBY0 568 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 ZNF224Q9NZL3 707 aa20.97■□□□□ 0.95
HLA-C-209ENST00000495835 FARS2O95363 451 aaKnown RBP20.96■□□□□ 0.95
HLA-C-209ENST00000495835 ZNF35P13682 527 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 PDLIM4P50479 330 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 DAP3P51398 398 aaKnown RBP20.96■□□□□ 0.95
HLA-C-209ENST00000495835 C8orf82Q6P1X6 216 aaPredicted RBP20.96■□□□□ 0.95
HLA-C-209ENST00000495835 VHLLQ6RSH7 139 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 SLC22A24Q8N4F4 322 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 PFN4Q8NHR9 129 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 HTRA1Q92743 480 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 SORCS2Q96PQ0 1159 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 DOK1Q99704 481 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 MRPL13Q9BYD1 178 aaKnown RBP20.96■□□□□ 0.95
HLA-C-209ENST00000495835 INIPQ9NRY2 104 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 CMAHPQ9Y471 501 aa20.96■□□□□ 0.95
HLA-C-209ENST00000495835 YLPM1P49750 1951 aaKnown RBP20.96■□□□□ 0.95
HLA-C-209ENST00000495835 JMJD1CQ15652 2540 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 ERCC1P07992 297 aaPredicted RBP20.95■□□□□ 0.94
HLA-C-209ENST00000495835 ZNF133P52736 654 aaPredicted RBP20.95■□□□□ 0.94
HLA-C-209ENST00000495835 CLRN1P58418 232 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 LIPEQ05469 1076 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 MELKQ14680 651 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 TAF11Q15544 211 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 ANKDD1AQ495B1 522 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 SKA3Q8IX90 412 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 CMTM5Q96DZ9 223 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 VRK1Q99986 396 aaPredicted RBP20.95■□□□□ 0.94
HLA-C-209ENST00000495835 C20orf141Q9NUB4 165 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 TMEM38BQ9NVV0 291 aa20.95■□□□□ 0.94
HLA-C-209ENST00000495835 A4GNTQ9UNA3 340 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms