RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ANKRD65E5RJM6 399 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 H3BNX3 289 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 RPL36A-HNRNPH2H7BZ11 118 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 PDLIM1O00151 329 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 LYZL6O75951 148 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 PGA4P0DJD7 388 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 PGA3P0DJD8 388 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 ROR2Q01974 943 aaKnown RBP15.07■□□□□ 0
HDAC6-235ENST00000495515 STK11Q15831 433 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 THSD4Q6ZMP0 1018 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 P2RY8Q86VZ1 359 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 ZNF433Q8N7K0 673 aaPredicted RBP15.07■□□□□ 0
HDAC6-235ENST00000495515 C1orf162Q8NEQ5 155 aaPredicted RBP15.07■□□□□ 0
HDAC6-235ENST00000495515 NOXO1Q8NFA2 376 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 TMEM54Q969K7 222 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 SAMD8Q96LT4 415 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 ZNF570Q96NI8 536 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 TSPAN32Q96QS1 320 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 RBP7Q96R05 134 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 MED18Q9BUE0 208 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 ALG12Q9BV10 488 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 IFT27Q9BW83 186 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 OSBPL10Q9BXB5 764 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 ACTR6Q9GZN1 396 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 SEMA6AQ9H2E6 1030 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 CRLF2Q9HC73 371 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 GPR35Q9HC97 309 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 IL20Q9NYY1 176 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 SPTAN1Q13813 2472 aaKnown RBP15.07■□□□□ 0
HDAC6-235ENST00000495515 NAV2Q8IVL1 2488 aa15.07■□□□□ 0
HDAC6-235ENST00000495515 USP9YO00507 2555 aaPredicted RBP15.06■□□□□ 0
HDAC6-235ENST00000495515 IMPA2O14732 288 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 ARPC3O15145 178 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 IDH3BO43837 385 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 AHCYL1O43865 530 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 TRMUO75648 421 aaKnown RBP15.06■□□□□ 0
HDAC6-235ENST00000495515 ZNF26P17031 533 aaPredicted RBP15.06■□□□□ 0
HDAC6-235ENST00000495515 PRKACGP22612 351 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 NOS3P29474 1203 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 SDHAP31040 664 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 HOXC12P31275 282 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 FXYD6P3P58550 94 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 LGALS3BPQ08380 585 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 C1QTNF12Q5T7M4 302 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 HS3ST5Q8IZT8 346 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 C17orf78Q8N4C9 275 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 ACBD4Q8NC06 268 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 ICA1LQ8NDH6 482 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 FAM222BQ8WU58 562 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 DACH2Q96NX9 599 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 ERMAPQ96PL5 475 aaPredicted RBP15.06■□□□□ 0
HDAC6-235ENST00000495515 PKP2Q99959 881 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 NIPSNAP1Q9BPW8 284 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 MRPL13Q9BYD1 178 aaKnown RBP15.06■□□□□ 0
HDAC6-235ENST00000495515 TBC1D23Q9NUY8 699 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 IL20RAQ9UHF4 553 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 POFUT2Q9Y2G5 429 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 ADAM18Q9Y3Q7 739 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 IER3IP1Q9Y5U9 82 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 COL12A1Q99715 3063 aa15.06■□□□□ 0
HDAC6-235ENST00000495515 CACNA1CQ13936 2221 aa15.05■□□□□ 0
HDAC6-235ENST00000495515 SH3D21A4FU49 640 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 H3BN98 237 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 CASKO14936 926 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 ARHGEF9O43307 516 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 RAD51DO75771 328 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 PPP1R3DO95685 299 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 TXNDC12O95881 172 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 ITGA5P08648 1049 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 CDH2P19022 906 aaPredicted RBP15.05■□□□□ -0
HDAC6-235ENST00000495515 CCKARP32238 428 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 CD47Q08722 323 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 CEACAM16Q2WEN9 425 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 C9orf135Q5VTT2 229 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 FAHD1Q6P587 224 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 FAM122BQ7Z309 247 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 ADCK1Q86TW2 530 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 SYT14Q8NB59 555 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 ZNF519Q8TB69 540 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 TEX47Q8TBZ9 253 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 MAGEE2Q8TD90 523 aaPredicted RBP15.05■□□□□ -0
HDAC6-235ENST00000495515 HSD17B8Q92506 261 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 S100PBPQ96BU1 408 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 MUCL1Q96DR8 90 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 Q96M85 177 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 MUS81Q96NY9 551 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 GABARAPL1Q9H0R8 117 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 EGLN3Q9H6Z9 239 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 SMURF2Q9HAU4 748 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 PAPOLBQ9NRJ5 636 aaKnown RBP15.05■□□□□ -0
HDAC6-235ENST00000495515 ZNF226Q9NYT6 803 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 KCNN3Q9UGI6 736 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 ENOPH1Q9UHY7 261 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 BAIAP2Q9UQB8 552 aa15.05■□□□□ -0
HDAC6-235ENST00000495515 TEX13CA0A0J9YWL9 993 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 ZNF99A8MXY4 864 aaPredicted RBP15.04■□□□□ -0
HDAC6-235ENST00000495515 SOX14O95416 240 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 BAG2O95816 211 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 QDPRP09417 244 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 OSMP13725 252 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms