RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 LRP11Q86VZ4 500 aa18.98■□□□□ 0.63
HDDC3-203ENST00000494993 SMYD1Q8NB12 490 aa18.98■□□□□ 0.63
HDDC3-203ENST00000494993 MYEF2Q9P2K5 600 aaKnown RBP18.98■□□□□ 0.63
HDDC3-203ENST00000494993 CHP2O43745 196 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 HPXP02790 462 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 TCN1P20061 433 aaPredicted RBP18.97■□□□□ 0.63
HDDC3-203ENST00000494993 PCMT1P22061 227 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 ATP4BP51164 291 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 SEC24CP53992 1094 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 PCBP3P57721 371 aaKnown RBP18.97■□□□□ 0.63
HDDC3-203ENST00000494993 RAB39AQ14964 217 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 MAD2L1BPQ15013 274 aaPredicted RBP18.97■□□□□ 0.63
HDDC3-203ENST00000494993 REP15Q6BDI9 236 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 DLEU7Q6UYE1 221 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 PIWIL3Q7Z3Z3 882 aaKnown RBP18.97■□□□□ 0.63
HDDC3-203ENST00000494993 LRRC8CQ8TDW0 803 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 TMEM54Q969K7 222 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 ARHGDIGQ99819 225 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 SLC7A8Q9UHI5 535 aa18.97■□□□□ 0.63
HDDC3-203ENST00000494993 B4DSR2 109 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 OR6A2O95222 327 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 ACHEP22303 614 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 COL8A2P25067 703 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 GPR6P46095 362 aaPredicted RBP18.96■□□□□ 0.63
HDDC3-203ENST00000494993 RUNDC3AQ59EK9 446 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 WDR88Q6ZMY6 472 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 RINLQ6ZS11 566 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 SLC35D2Q76EJ3 337 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 PTOV1Q86YD1 416 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 ZNF584Q8IVC4 421 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 SKA3Q8IX90 412 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 OR6X1Q8NH79 312 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 FGFBP3Q8TAT2 258 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 RDH5Q92781 318 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 GLTPQ9NZD2 209 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 FZR1Q9UM11 496 aa18.96■□□□□ 0.63
HDDC3-203ENST00000494993 ERLIN1O75477 346 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 OPN1SWP03999 348 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 SERPINA5P05154 406 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 PATE4P0C8F1 98 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 ITGA2P17301 1181 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 LSP1P33241 339 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 ZP4Q12836 540 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 NPTX1Q15818 432 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 ZNF74Q16587 644 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 DUSP7Q16829 419 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 BEND6Q5SZJ8 279 aaPredicted RBP18.95■□□□□ 0.62
HDDC3-203ENST00000494993 GLCCI1Q86VQ1 547 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 CARM1Q86X55 608 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 C11orf65Q8NCR3 313 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 GPR32P1Q8NGA4 272 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 OR6T1Q8NGN1 323 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 CLDND2Q8NHS1 167 aa18.95■□□□□ 0.62
HDDC3-203ENST00000494993 CPSF4LA6NMK7 179 aaKnown RBP18.94■□□□□ 0.62
HDDC3-203ENST00000494993 SAGP10523 405 aaPredicted RBP18.94■□□□□ 0.62
HDDC3-203ENST00000494993 RBBP4Q09028 425 aa18.94■□□□□ 0.62
HDDC3-203ENST00000494993 ENTPD8Q5MY95 495 aa18.94■□□□□ 0.62
HDDC3-203ENST00000494993 AGBL2Q5U5Z8 902 aa18.94■□□□□ 0.62
HDDC3-203ENST00000494993 SLC22A24Q8N4F4 322 aa18.94■□□□□ 0.62
HDDC3-203ENST00000494993 RACGAP1Q9H0H5 632 aa18.94■□□□□ 0.62
HDDC3-203ENST00000494993 NARFLQ9H6Q4 476 aa18.94■□□□□ 0.62
HDDC3-203ENST00000494993 ZNF275Q9NSD4 429 aaPredicted RBP18.94■□□□□ 0.62
HDDC3-203ENST00000494993 TAS2R5Q9NYW4 299 aa18.94■□□□□ 0.62
HDDC3-203ENST00000494993 DUSP13Q9UII6 198 aa18.94■□□□□ 0.62
HDDC3-203ENST00000494993 LEF1Q9UJU2 399 aaPredicted RBP18.94■□□□□ 0.62
HDDC3-203ENST00000494993 ZNF346Q9UL40 294 aaKnown RBP18.94■□□□□ 0.62
HDDC3-203ENST00000494993 A0A1W2PPW3 197 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 M0QX08 132 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 ENTPD5O75356 428 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 NCR1O76036 304 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 LYPD3O95274 346 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 CH25HO95992 272 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 THY1P04216 161 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 MELKQ14680 651 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 CYP51A1Q16850 503 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 TTC33Q6PID6 262 aaPredicted RBP18.93■□□□□ 0.62
HDDC3-203ENST00000494993 DHDDSQ86SQ9 333 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 YIPF5Q969M3 257 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 ZNF566Q969W8 418 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 ZNF385DQ9H6B1 395 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 NANSQ9NR45 359 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 TMEM38BQ9NVV0 291 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 METRNQ9UJH8 293 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 WNK2Q9Y3S1 2297 aa18.93■□□□□ 0.62
HDDC3-203ENST00000494993 FAM157AC9JC47 383 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 DHHO43323 396 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 RNF13O43567 381 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 TFP02787 698 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 OR8G3PP0DMU2 310 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 NAT2P11245 290 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 TMEM33P57088 247 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 MRPS11P82912 194 aaKnown RBP18.92■□□□□ 0.62
HDDC3-203ENST00000494993 RGS7BPQ6MZT1 257 aaPredicted RBP18.92■□□□□ 0.62
HDDC3-203ENST00000494993 LRFN4Q6PJG9 635 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 DEF8Q6ZN54 512 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 RBM45Q8IUH3 476 aaKnown RBP18.92■□□□□ 0.62
HDDC3-203ENST00000494993 OR4D11Q8NGI4 311 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 ADAMTS16Q8TE57 1224 aa18.92■□□□□ 0.62
HDDC3-203ENST00000494993 SLC25A44Q96H78 314 aaPredicted RBP18.92■□□□□ 0.62
HDDC3-203ENST00000494993 SH3GL3Q99963 347 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms