RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MUC15Q8N387 334 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 FITM2Q8N6M3 262 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 SYT14Q8NB59 555 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 OR6X1Q8NH79 312 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 MAGEE2Q8TD90 523 aaPredicted RBP12.79□□□□□ -0.36
ATG4B-224ENST00000494132 ZNF566Q969W8 418 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 BPIFA2Q96DR5 249 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 LRR1Q96L50 414 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 ADAD1Q96M93 576 aaKnown RBP12.79□□□□□ -0.36
ATG4B-224ENST00000494132 ZNF347Q96SE7 839 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 CDRT15Q96T59 188 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 FOXB1Q99853 325 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 CACNG6Q9BXT2 260 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 INIPQ9NRY2 104 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 FAIMQ9NVQ4 179 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 GLTPQ9NZD2 209 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 C2CD3Q4AC94 2353 aa12.79□□□□□ -0.36
ATG4B-224ENST00000494132 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 A0A087WUU8 490 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 A0A1W2PRG6 482 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 IGHV4-39P01824 125 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 PATE4P0C8F1 98 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 PGA4P0DJD7 388 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 PGA3P0DJD8 388 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 SAGP10523 405 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-224ENST00000494132 CD79AP11912 226 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 GPR4P46093 362 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 CLRN1P58418 232 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 AGAP6Q5VW22 663 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 LRFN4Q6PJG9 635 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 ZNF730Q6ZMV8 503 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 FBXL14Q8N1E6 418 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 OR51A7Q8NH64 312 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 FGFBP3Q8TAT2 258 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 ASB10Q8WXI3 467 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 SLC25A44Q96H78 314 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-224ENST00000494132 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 C18orf12Q96KH6 178 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 KCNS3Q9BQ31 491 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 CBLN4Q9NTU7 201 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 ZNF224Q9NZL3 707 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 CRNNQ9UBG3 495 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-224ENST00000494132 RPS6KA6Q9UK32 745 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 ENPP4Q9Y6X5 453 aa12.78□□□□□ -0.36
ATG4B-224ENST00000494132 GMNNO75496 209 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 TRMUO75648 421 aaKnown RBP12.77□□□□□ -0.37
ATG4B-224ENST00000494132 IGKV3-15P01624 115 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 IGLV1-44P01699 117 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 IGHG1P01857 330 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 CRYAAP02489 173 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 QDPRP09417 244 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 PAX1P15863 534 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 CBR1P16152 277 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 ACVR1BP36896 505 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 VLDLRP98155 873 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 PRKCDQ05655 676 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 ALG10Q5BKT4 473 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 C11orf71Q6IPW1 123 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 PRSS57Q6UWY2 283 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 CLDN22Q8N7P3 220 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 NOXO1Q8NFA2 376 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 OR13C2Q8NGS9 318 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 ACOT11Q8WXI4 607 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-224ENST00000494132 FBXO17Q96EF6 278 aa12.77□□□□□ -0.37
ATG4B-224ENST00000494132 TRMT61AQ96FX7 289 aaKnown RBP12.77□□□□□ -0.37
ATG4B-224ENST00000494132 NMNAT1Q9HAN9 279 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-224ENST00000494132 DCAF13Q9NV06 445 aaKnown RBP12.77□□□□□ -0.37
ATG4B-224ENST00000494132 SAMD4AQ9UPU9 718 aaKnown RBP12.77□□□□□ -0.37
ATG4B-224ENST00000494132 EFCAB9A8MZ26 197 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 ARPC2O15144 300 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 DHHO43323 396 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 SLC2A10O95528 541 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 IGF2P01344 180 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 INHBBP09529 407 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 TSPAN19P0C672 248 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 HSD17B1P14061 328 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-224ENST00000494132 ACADSP16219 412 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 GIPRP48546 466 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 PTDSS1P48651 473 aaKnown RBP12.76□□□□□ -0.37
ATG4B-224ENST00000494132 FMODQ06828 376 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 GSG1Q2KHT4 349 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 FGD3Q5JSP0 725 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 SAMD4BQ5PRF9 694 aaKnown RBP12.76□□□□□ -0.37
ATG4B-224ENST00000494132 GKAP1Q5VSY0 366 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-224ENST00000494132 C16orf89Q6UX73 402 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 CYP4Z1Q86W10 505 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 SKA3Q8IX90 412 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 ANKS4BQ8N8V4 417 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 MAPK1IP1LQ8NDC0 245 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 OR52J3Q8NH60 311 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 SLC7A13Q8TCU3 470 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 LIPHQ8WWY8 451 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 HDAC2Q92769 488 aaKnown RBP12.76□□□□□ -0.37
ATG4B-224ENST00000494132 MCHR2Q969V1 340 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 FAM46AQ96IP4 442 aaKnown RBP12.76□□□□□ -0.37
ATG4B-224ENST00000494132 TNFRSF13CQ96RJ3 184 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 SH3GL3Q99963 347 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 KATNB1Q9BVA0 655 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 B3GNT2Q9NY97 397 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms