RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CCL21O00585 134 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 ICOSLGO75144 302 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 SUPT3HO75486 399 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 CT62P0C5K7 136 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 ZDHHC11BP0C7U3 371 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 UBTFL1P0CB47 393 aaPredicted RBP2.19□□□□□ -2.06
SMC4-223ENST00000493695 GKN3PP0CG01 181 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 SMIM10L1P0DMW3 83 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 PPIAL4FP0DN26 164 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 KITLGP21583 273 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 HOXA9P31269 272 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 HSD17B2P37059 387 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 TAGLN2P37802 199 aaKnown RBP2.19□□□□□ -2.06
SMC4-223ENST00000493695 REG3AQ06141 175 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 MADCAM1Q13477 382 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 ARHGAP19Q14CB8 494 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 RFX4Q33E94 735 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 PHYHD1Q5SRE7 291 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 TSPO2Q5TGU0 170 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 H2AFVQ71UI9 128 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 RUFY3Q7L099 469 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 THOC6Q86W42 341 aaKnown RBP2.19□□□□□ -2.06
SMC4-223ENST00000493695 TGIF2LXQ8IUE1 241 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 C12orf56Q8IXR9 622 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 OR1L6Q8NGR2 347 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 ZNF596Q8TC21 504 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 DTX3LQ8TDB6 740 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 TUBGCP3Q96CW5 907 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 SMIM10Q96HG1 83 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 KCTD14Q9BQ13 255 aaPredicted RBP2.19□□□□□ -2.06
SMC4-223ENST00000493695 CDC42EP4Q9H3Q1 356 aaKnown RBP2.19□□□□□ -2.06
SMC4-223ENST00000493695 TPK1Q9H3S4 243 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 LHX9Q9NQ69 397 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 GNPTGQ9UJJ9 305 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 COL1A2P08123 1366 aa2.19□□□□□ -2.06
SMC4-223ENST00000493695 IGLV4-69A0A075B6H9 119 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 DLGAP1O14490 977 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 SLC25A27O95847 323 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 ALDOBP05062 364 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 C2P06681 752 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 SLC26A3P40879 764 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 ZNF136P52737 540 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 SUB1P53999 127 aaKnown RBP eCLIP2.18□□□□□ -2.06
SMC4-223ENST00000493695 HERVK_113P61574 105 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 ENPEPQ07075 957 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 BST1Q10588 318 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 BST2Q10589 180 aaKnown RBP2.18□□□□□ -2.06
SMC4-223ENST00000493695 TMEM183BQ1AE95 376 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 PEX26Q7Z412 305 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 LINC01551Q86U37 167 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 LHFPL3Q86UP9 236 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 TMEM183AQ8IXX5 376 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 SAXO1Q8IYX7 474 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 Q8N976 141 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 CD300LFQ8TDQ1 290 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 TCEANC2Q96MN5 208 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 LINC00597Q9H2U6 94 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 MRPL47Q9HD33 250 aaKnown RBP2.18□□□□□ -2.06
SMC4-223ENST00000493695 TBX21Q9UL17 535 aa2.18□□□□□ -2.06
SMC4-223ENST00000493695 IGLV11-55A0A075B6I3 123 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 SYNJ2BP-COX16A0A087WUM0 186 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 H3BNH8 94 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 C6orf47O95873 294 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 NDUFB10O96000 172 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 IGHDP01880 384 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 BGLAPP02818 100 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 CSF3P09919 207 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 ZNF30P17039 623 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 CALRP27797 417 aaKnown RBP2.17□□□□□ -2.06
SMC4-223ENST00000493695 CXCL5P42830 114 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 CCR8P51685 355 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 UGT2B15P54855 530 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 PLP1P60201 277 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 RPS21P63220 83 aaKnown RBP2.17□□□□□ -2.06
SMC4-223ENST00000493695 HMGCS1Q01581 520 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 PAX5Q02548 391 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 AQP6Q13520 282 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 DDX39BQ13838 428 aaKnown RBP2.17□□□□□ -2.06
SMC4-223ENST00000493695 ZMYND11Q15326 602 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 IMMTQ16891 758 aaKnown RBP2.17□□□□□ -2.06
SMC4-223ENST00000493695 MAJINQ3KP22 176 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 COA6Q5JTJ3 125 aaKnown RBP2.17□□□□□ -2.06
SMC4-223ENST00000493695 LCN12Q6JVE5 192 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 KDM7AQ6ZMT4 941 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 CDR2LQ86X02 465 aaPredicted RBP2.17□□□□□ -2.06
SMC4-223ENST00000493695 C15orf56Q8N910 161 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 SDR9C7Q8NEX9 313 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 ACTRT1Q8TDG2 376 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 SHC3Q92529 594 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 IFT74Q96LB3 600 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 WFIKKN1Q96NZ8 548 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 SH3GL3Q99963 347 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 ECSITQ9BQ95 431 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 HDHD3Q9BSH5 251 aaPredicted RBP2.17□□□□□ -2.06
SMC4-223ENST00000493695 GCOM2Q9BZD3 368 aaPredicted RBP2.17□□□□□ -2.06
SMC4-223ENST00000493695 CLMPQ9H6B4 373 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 TM9SF3Q9HD45 589 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 SUN2Q9UH99 717 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 SLC7A8Q9UHI5 535 aa2.17□□□□□ -2.06
SMC4-223ENST00000493695 HEBP2Q9Y5Z4 205 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms