RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 STAMBPO95630 424 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 RAB36O95755 333 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 IGFBP1P08833 259 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-223ENST00000493618 LYNX1P0DP58 116 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF14P17017 642 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-223ENST00000493618 NR4A1P22736 598 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 IGFBP5P24593 272 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 GIPRP48546 466 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 GZMKP49863 264 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 RAB1AP62820 205 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 RAB39AQ14964 217 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 TRMT5Q32P41 509 aaKnown RBP12.64□□□□□ -0.39
ATG4B-223ENST00000493618 INTS11Q5TA45 600 aaKnown RBP12.64□□□□□ -0.39
ATG4B-223ENST00000493618 CARM1Q86X55 608 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 SKA3Q8IX90 412 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 IL17RDQ8NFM7 739 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 TSPEARQ8WU66 669 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 PRSS27Q9BQR3 290 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 SOX7Q9BT81 388 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 MRPL37Q9BZE1 423 aaKnown RBP12.64□□□□□ -0.39
ATG4B-223ENST00000493618 MYOZ1Q9NP98 299 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-223ENST00000493618 GLTPQ9NZD2 209 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 CDC42EP3Q9UKI2 254 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 FZR1Q9UM11 496 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 SH3GLB1Q9Y371 365 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 CMAHPQ9Y471 501 aa12.64□□□□□ -0.39
ATG4B-223ENST00000493618 MXRA5Q9NR99 2828 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 LRP5LA4QPB2 252 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 HIST1H2ABP04908 130 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 FAM157CP0CG43 387 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF35P13682 527 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 MYBPC1Q00872 1141 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 ZP4Q12836 540 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-223ENST00000493618 MMEL1Q495T6 779 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 REP15Q6BDI9 236 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 DEF8Q6ZN54 512 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 HIST3H2AQ7L7L0 130 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF627Q7L945 461 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 LRP11Q86VZ4 500 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 SNX32Q86XE0 403 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 NKAIN4Q8IVV8 208 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 OR6X1Q8NH79 312 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 PFN4Q8NHR9 129 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 HIST1H2ACQ93077 130 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 LRRC58Q96CX6 371 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 MSI2Q96DH6 328 aaKnown RBP12.63□□□□□ -0.39
ATG4B-223ENST00000493618 SH3GL3Q99963 347 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 ECSITQ9BQ95 431 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 SYT3Q9BQG1 590 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 SIKE1Q9BRV8 207 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 SHARPINQ9H0F6 387 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 MEPEQ9NQ76 525 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-223ENST00000493618 KCNS2Q9ULS6 477 aa12.63□□□□□ -0.39
ATG4B-223ENST00000493618 BLOC1S5-TXNDC5H3BN57 136 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 FXYD1O00168 92 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 MRASO14807 208 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 PHF1O43189 567 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-223ENST00000493618 UBL3O95164 117 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 ERCC1P07992 297 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-223ENST00000493618 ASAH2BP0C7U1 165 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF23P17027 643 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 TCN1P20061 433 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-223ENST00000493618 IL2RGP31785 369 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 UGT2B15P54855 530 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 TAS2R41P59536 307 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 KLF10Q13118 480 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 MAD2L1BPQ15013 274 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-223ENST00000493618 GKAP1Q5VSY0 366 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-223ENST00000493618 METTL21CQ5VZV1 264 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 FAM166AQ6J272 317 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 CGB2Q6NT52 195 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 LRFN4Q6PJG9 635 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 NANOGNBQ7Z5D8 188 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 CALHM3Q86XJ0 350 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 PHC2Q8IXK0 858 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 SLC22A24Q8N4F4 322 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 SPATA3Q8NHX4 192 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 TMEM255BQ8WV15 326 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 NEU4Q8WWR8 484 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF566Q969W8 418 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 MRPL24Q96A35 216 aaKnown RBP12.62□□□□□ -0.39
ATG4B-223ENST00000493618 MPP4Q96JB8 637 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 PCDHAC1Q9H158 963 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 FGFR1OP2Q9NVK5 253 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 TMEM160Q9NX00 188 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 MYEF2Q9P2K5 600 aaKnown RBP12.62□□□□□ -0.39
ATG4B-223ENST00000493618 ZNF229Q9UJW7 825 aa12.62□□□□□ -0.39
ATG4B-223ENST00000493618 F13BP05160 661 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 QDPRP09417 244 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 PGA4P0DJD7 388 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 PGA3P0DJD8 388 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 CCL2P13500 99 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 ALDH3B1P43353 468 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 OR1E2P47887 323 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 ARFIP2P53365 341 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 SEC24CP53992 1094 aa12.61□□□□□ -0.39
ATG4B-223ENST00000493618 CLRN1P58418 232 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms