RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 STX18Q9P2W9 335 aaKnown RBP9.99□□□□□ -0.81
COL6A3-213ENST00000493475 DUSP13Q9UII6 198 aa9.99□□□□□ -0.81
COL6A3-213ENST00000493475 A0A0B4J2E0 115 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 A0A1B0GX12 115 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 LILRA1O75019 489 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 SEC14L2O76054 403 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 NR2C1P13056 603 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 B4GALT1P15291 398 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 DRD4P21917 467 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 RAD52P43351 418 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 GIPRP48546 466 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 ZNF84P51523 738 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 RBBP4Q09028 425 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 CCNIQ14094 377 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 CYP51A1Q16850 503 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 SLC36A2Q495M3 483 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 FAM209AQ5JX71 171 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 INTS11Q5TA45 600 aaKnown RBP9.98□□□□□ -0.81
COL6A3-213ENST00000493475 RGS7BPQ6MZT1 257 aaPredicted RBP9.98□□□□□ -0.81
COL6A3-213ENST00000493475 TTC33Q6PID6 262 aaPredicted RBP9.98□□□□□ -0.81
COL6A3-213ENST00000493475 EPGNQ6UW88 154 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 TREML1Q86YW5 311 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 C11orf65Q8NCR3 313 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 CPEB3Q8NE35 698 aaKnown RBP9.98□□□□□ -0.81
COL6A3-213ENST00000493475 SLC26A7Q8TE54 656 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 DYDC1Q8WWB3 177 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 ZNF566Q969W8 418 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 TIMD4Q96H15 378 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 C7orf26Q96N11 449 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 CCDC28BQ9BUN5 200 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 EMC6Q9BV81 110 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 RNF121Q9H920 327 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 SEC61A2Q9H9S3 476 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 CDH20Q9HBT6 801 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 NANSQ9NR45 359 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 MED29Q9NX70 200 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 SEC14L4Q9UDX3 406 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 CHST2Q9Y4C5 530 aa9.98□□□□□ -0.81
COL6A3-213ENST00000493475 ANK3Q12955 4377 aaKnown RBP9.98□□□□□ -0.81
COL6A3-213ENST00000493475 ARFGEF3Q5TH69 2177 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 IGKV1D-42A0A075B6H8 117 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 IQCMA0A1B0GVH7 501 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 GMNCA6NCL1 334 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 MS4A18H0YCH9 400 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 PLPP3O14495 311 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 TPD52L2O43399 206 aaKnown RBP9.97□□□□□ -0.81
COL6A3-213ENST00000493475 PPIHO43447 177 aaKnown RBP9.97□□□□□ -0.81
COL6A3-213ENST00000493475 RNF13O43567 381 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 CHP2O43745 196 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 SERPINA5P05154 406 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 MSMBP08118 114 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 UMPSP11172 480 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 ZNF14P17017 642 aaPredicted RBP9.97□□□□□ -0.81
COL6A3-213ENST00000493475 HTR2AP28223 471 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 BIDP55957 195 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 KLF3P57682 345 aaPredicted RBP9.97□□□□□ -0.81
COL6A3-213ENST00000493475 TBC1D28Q2M2D7 210 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 MS4A18Q3C1V0 323 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 NRN1LQ496H8 165 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 ZCCHC24Q8N2G6 241 aaKnown RBP9.97□□□□□ -0.81
COL6A3-213ENST00000493475 OR6X1Q8NH79 312 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 C11orf40Q8WZ69 217 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 TMEM186Q96B77 213 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 RAB39BQ96DA2 213 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 ZMYND19Q96E35 227 aaPredicted RBP9.97□□□□□ -0.81
COL6A3-213ENST00000493475 C1orf159Q96HA4 380 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 MPP4Q96JB8 637 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 SYT3Q9BQG1 590 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 MRPL37Q9BZE1 423 aaKnown RBP9.97□□□□□ -0.81
COL6A3-213ENST00000493475 BCL2L14Q9BZR8 327 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 SLC19A3Q9BZV2 496 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 DECR2Q9NUI1 292 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 B3GNT2Q9NY97 397 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 GLTPQ9NZD2 209 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 TRIM33Q9UPN9 1127 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 GMEB1Q9Y692 573 aa9.97□□□□□ -0.81
COL6A3-213ENST00000493475 CUBNO60494 3623 aa9.96□□□□□ -0.81
COL6A3-213ENST00000493475 TRAV20A0A0B4J274 112 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 TMEM129A0AVI4 362 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 MCIDASD6RGH6 385 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 C11orf98E9PRG8 122 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 ANGPT2O15123 496 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 BCL10O95999 233 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 IGHG1P01857 330 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 BGLAPP02818 100 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 ZNF35P13682 527 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 GPX2P18283 190 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 AQP1P29972 269 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 GUCA1AP43080 201 aaPredicted RBP9.96□□□□□ -0.82
COL6A3-213ENST00000493475 ALDH3B1P43353 468 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 ATP4BP51164 291 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 DAP3P51398 398 aaKnown RBP9.96□□□□□ -0.82
COL6A3-213ENST00000493475 CDH12P55289 794 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 CLRN1P58418 232 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 ACTG1P63261 375 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 AGKQ53H12 422 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 SLC35D2Q76EJ3 337 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 NANOGNBQ7Z5D8 188 aa9.96□□□□□ -0.82
COL6A3-213ENST00000493475 PATL1Q86TB9 770 aaKnown RBP9.96□□□□□ -0.82
COL6A3-213ENST00000493475 MYPOPQ86VE0 399 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms