RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ZNF716A6NP11 495 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 ZAR1LA6NP61 321 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 BHLHE40O14503 412 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 XKRYO14609 159 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 GPR171O14626 319 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 AKAP8O43823 692 aaKnown RBP11.9□□□□□ -0.5
MSH6-208ENST00000493177 IFNGP01579 166 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 HMGN1P05114 100 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 IGFBP2P18065 325 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 GRK5P34947 590 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 CAPGP40121 348 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 BIDP55957 195 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 RPL27P61353 136 aaKnown RBP11.9□□□□□ -0.5
MSH6-208ENST00000493177 CDK5Q00535 292 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 PDK3Q15120 406 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 TMEM201Q5SNT2 666 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 C6orf52Q5T4I8 152 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 SLX4IPQ5VYV7 408 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 OR2A2Q6IF42 318 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 ACSM5Q6NUN0 579 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 NIPAL3Q6P499 406 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 CREB3L2Q70SY1 520 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 LUZP2Q86TE4 346 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 JAZF1Q86VZ6 243 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 TUSC5Q8IXB3 177 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 CNEP1R1Q8N9A8 125 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 RASD2Q96D21 266 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 TXNDC15Q96J42 360 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 Q96M85 177 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 ZNF385AQ96PM9 386 aaKnown RBP11.9□□□□□ -0.5
MSH6-208ENST00000493177 SLC38A2Q96QD8 506 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 ZNF184Q99676 751 aaPredicted RBP11.9□□□□□ -0.5
MSH6-208ENST00000493177 EMC6Q9BV81 110 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 SFXN3Q9BWM7 321 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 TXNIPQ9H3M7 391 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 FANCFQ9NPI8 374 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 NRIP3Q9NQ35 241 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
MSH6-208ENST00000493177 FLVCR1Q9Y5Y0 555 aa11.9□□□□□ -0.5
MSH6-208ENST00000493177 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 IMPA2O14732 288 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 ARHGEF9O43307 516 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 TRAF3IP2O43734 574 aaPredicted RBP11.89□□□□□ -0.51
MSH6-208ENST00000493177 IDH3BO43837 385 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 SMNDC1O75940 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
MSH6-208ENST00000493177 IL18BPO95998 194 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 IGHMP01871 453 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 YES1P07947 543 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 APEHP13798 732 aaKnown RBP11.89□□□□□ -0.51
MSH6-208ENST00000493177 SDHAP31040 664 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 SLC16A1P53985 500 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 CDC42P60953 191 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 SIRPAP78324 504 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 CAMK2DQ13557 499 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 KRR1Q13601 381 aaKnown RBP11.89□□□□□ -0.51
MSH6-208ENST00000493177 SNAPC1Q16533 368 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 CARD17Q5XLA6 110 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 GPR139Q6DWJ6 353 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 AAED1Q7RTV5 226 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 HDDC2Q7Z4H3 204 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 LNX2Q8N448 690 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 OR4K13Q8NH42 304 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 FAM81AQ8TBF8 368 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 ASB10Q8WXI3 467 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 GMPPAQ96IJ6 420 aaPredicted RBP11.89□□□□□ -0.51
MSH6-208ENST00000493177 RBM24Q9BX46 236 aaKnown RBP11.89□□□□□ -0.51
MSH6-208ENST00000493177 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 GLRX2Q9NS18 164 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 IMPAD1Q9NX62 359 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 KLHL21Q9UJP4 597 aa11.89□□□□□ -0.51
MSH6-208ENST00000493177 NAV2Q8IVL1 2488 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 IGKV3D-15A0A087WSY6 115 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 SLC35F4A4IF30 521 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 A6NIZ1 184 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 ZNF724A8MTY0 619 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 M0R129 80 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 ARPC3O15145 178 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 SLC16A6O15403 523 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 MRPL33O75394 65 aaKnown RBP11.88□□□□□ -0.51
MSH6-208ENST00000493177 CLIC3O95833 236 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 HIST1H1CP16403 213 aaKnown RBP11.88□□□□□ -0.51
MSH6-208ENST00000493177 ZNF3P17036 446 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 GGT2P36268 569 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 CLRN1P58418 232 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 RAP1BP61224 184 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 RAP1AP62834 184 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 ADARB1P78563 741 aaKnown RBP11.88□□□□□ -0.51
MSH6-208ENST00000493177 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.88□□□□□ -0.51
MSH6-208ENST00000493177 FOXF2Q12947 444 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 KEAP1Q14145 624 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 FAM205BPQ63HN1 556 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 C12orf73Q69YU5 71 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 LEG1Q6P5S2 330 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 FAM122BQ7Z309 247 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 DEPDC4Q8N2C3 294 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 ARIH2OSQ8N7S6 290 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 ACBD4Q8NC06 268 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 SDR9C7Q8NEX9 313 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 OR52E2Q8NGJ4 325 aa11.88□□□□□ -0.51
MSH6-208ENST00000493177 OTULINQ96BN8 352 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms