RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CREB3L1Q96BA8 519 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF578Q96N58 590 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-220ENST00000492280 TMEM185BQ9H7F4 350 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 OR5V1Q9UGF6 321 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SPATA2Q9UM82 520 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 ADAMTS9Q9P2N4 1935 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 TRABD2BA6NFA1 517 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 BGLAPP02818 100 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 GZMKP49863 264 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 C19orf57Q0VDD7 668 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SNTA1Q13424 505 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 ALKBH1Q13686 389 aaKnown RBP11.25□□□□□ -0.61
HMGN1-220ENST00000492280 CDC20BQ86Y33 519 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF417Q8TAU3 575 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 HAVCR2Q8TDQ0 301 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 CCDC74AQ96AQ1 378 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 ARL5BQ96KC2 179 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF587Q96SQ5 575 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-220ENST00000492280 SLC19A3Q9BZV2 496 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 COPS7AQ9UBW8 275 aa11.25□□□□□ -0.61
HMGN1-220ENST00000492280 H3BML4 177 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 TSPAN2O60636 221 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 PTBP1P26599 531 aaKnown RBP eCLIP11.24□□□□□ -0.61
HMGN1-220ENST00000492280 KIR3DL2P43630 455 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 GPLD1P80108 840 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 FOXK1P85037 733 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 SLC35D3Q5M8T2 416 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 LINC00346Q8IVM7 164 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF440Q8IYI8 595 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 GIMAP1Q8WWP7 306 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 MED28Q9H204 178 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 DPAGT1Q9H3H5 408 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 AKIRIN1Q9H9L7 192 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-220ENST00000492280 TCF7L1Q9HCS4 588 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 FAM186AA6NE01 2351 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 ADAMTS20P59510 1910 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 ARID1AO14497 2285 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 TMED7-TICAM2A0A0A6YYA0 188 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 A0A1B0GX78 115 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF593O00488 134 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-220ENST00000492280 BCAT2O15382 392 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-220ENST00000492280 PNPP00491 289 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 HPXP02790 462 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 CDK2P24941 298 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 DPP4P27487 766 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 DCTDP32321 178 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 EFNB2P52799 333 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 INSM1Q01101 510 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-220ENST00000492280 YIF1BQ5BJH7 314 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 WDR38Q5JTN6 314 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 OGFOD3Q6PK18 319 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 ARSKQ6UWY0 536 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 SLC29A4Q7RTT9 530 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 OR5M1Q8NGP8 315 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 OR2G2Q8NGZ5 317 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 LILRB4Q8NHJ6 448 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 TSEN15Q8WW01 171 aaKnown RBP11.24□□□□□ -0.61
HMGN1-220ENST00000492280 ZNF501Q96CX3 271 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-220ENST00000492280 INTS14Q96SY0 518 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 LAT2Q9GZY6 243 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 ADAM19Q9H013 955 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 OR10A4Q9H209 315 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 ING3Q9NXR8 418 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 FBXL3Q9UKT7 428 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 TMED7Q9Y3B3 224 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 MMACHCQ9Y4U1 282 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 FKBP7Q9Y680 259 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 V9GY05 133 aa11.24□□□□□ -0.61
HMGN1-220ENST00000492280 LOC101059948A0A1B0GTJ6 334 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 AIPO00170 330 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 XKRYO14609 159 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 KDM4BO94953 1096 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 GP1BBP13224 206 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 CCKBRP32239 447 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 MFGE8Q08431 387 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 MRPL28Q13084 256 aaKnown RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 ST3GAL2Q16842 350 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 COL28A1Q2UY09 1125 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 Q499Y3 187 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 CCDC92Q53HC0 331 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 UBE2NLQ5JXB2 153 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 COX15Q7KZN9 410 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 TCTE3Q8IZS6 198 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 TEX19Q8NA77 164 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 OR11H4Q8NGC9 324 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 OR1N1Q8NGS0 311 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 STT3BQ8TCJ2 826 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 DEDD2Q8WXF8 326 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 PELOQ9BRX2 385 aaKnown RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 ELOVL3Q9HB03 270 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 MRPL22Q9NWU5 206 aaKnown RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 MED29Q9NX70 200 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 MED11Q9P086 117 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 ABRACLQ9P1F3 81 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 BLACEA4D250 179 aa11.23□□□□□ -0.61
HMGN1-220ENST00000492280 SOX1O00570 391 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 EIF1AYO14602 144 aaKnown RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 GATBO75879 557 aaKnown RBP11.23□□□□□ -0.61
HMGN1-220ENST00000492280 RENP00797 406 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms