RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 HNRNPCL4P0DMR1 293 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 GTF2E2P29084 291 aaKnown RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 CRATP43155 626 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 RPL14P50914 215 aaKnown RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 ANXA11P50995 505 aaKnown RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 CRISP3P54108 245 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 DSTNP60981 165 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 GALK2Q01415 458 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 NKPD1Q17RQ9 610 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 MIDNQ504T8 468 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 KLF17Q5JT82 389 aaPredicted RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 RGS7BPQ6MZT1 257 aaPredicted RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 UEVLDQ8IX04 471 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 BCL6BQ8N143 479 aaPredicted RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 TEX29Q8N6K0 151 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 SLC38A4Q969I6 547 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 RAB39BQ96DA2 213 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 WFDC6Q9BQY6 131 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 DENND2DQ9H6A0 471 aaPredicted RBP11.23□□□□□ -0.61
USF1-206ENST00000491629 C12orf10Q9HB07 376 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 NKIRAS2Q9NYR9 191 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 CALML5Q9NZT1 146 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 POFUT2Q9Y2G5 429 aa11.23□□□□□ -0.61
USF1-206ENST00000491629 A0A0G2JK05 382 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 AKAP8O43823 692 aaKnown RBP11.22□□□□□ -0.61
USF1-206ENST00000491629 TPST2O60704 377 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 KRT75O95678 551 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 RAB36O95755 333 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 SERPINE1P05121 402 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 MAKP20794 623 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 PRTN3P24158 256 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 LCN2P80188 198 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 USP51Q70EK9 711 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 DOK3Q7L591 496 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 NET1Q7Z628 596 aaPredicted RBP11.22□□□□□ -0.61
USF1-206ENST00000491629 LRRC17Q8N6Y2 441 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 LSMEM1Q8N8F7 131 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 DEFB108BQ8NET1 73 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 MAL2Q969L2 176 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 ULBP2Q9BZM5 246 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 FAM107BQ9H098 131 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 TPT1P8Q9HAU6 139 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 NTN4Q9HB63 628 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 DDX28Q9NUL7 540 aaKnown RBP11.22□□□□□ -0.61
USF1-206ENST00000491629 ZNF69Q9UC07 566 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 ZNF232Q9UNY5 417 aa11.22□□□□□ -0.61
USF1-206ENST00000491629 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.22□□□□□ -0.61
USF1-206ENST00000491629 PLPP3O14495 311 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 RFXANKO14593 260 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 TPST1O60507 370 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 UBL3O95164 117 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 ZCCHC18P0CG32 403 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 SLC1A6P48664 564 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 KLF3P57682 345 aaPredicted RBP11.21□□□□□ -0.61
USF1-206ENST00000491629 TSTQ16762 297 aaKnown RBP11.21□□□□□ -0.61
USF1-206ENST00000491629 TMEM154Q6P9G4 183 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 LRFN4Q6PJG9 635 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 C10orf111Q8N326 155 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 SLC22A24Q8N4F4 322 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 SLC30A7Q8NEW0 376 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 OR6N1Q8NGY5 312 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 SYNPRQ8TBG9 265 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 MGARPQ8TDB4 240 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 TMEM54Q969K7 222 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 SLC35B4Q969S0 331 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 SH3GL3Q99963 347 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 BCL2L10Q9HD36 194 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 TCF7L2Q9NQB0 619 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 MMP26Q9NRE1 261 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 DCAF16Q9NXF7 216 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 LEF1Q9UJU2 399 aaPredicted RBP11.21□□□□□ -0.61
USF1-206ENST00000491629 IFT52Q9Y366 437 aa11.21□□□□□ -0.61
USF1-206ENST00000491629 SOX21Q9Y651 276 aaPredicted RBP11.21□□□□□ -0.61
USF1-206ENST00000491629 NQO1P15559 274 aaKnown RBP11.2□□□□□ -0.62
USF1-206ENST00000491629 HOXB9P17482 250 aaPredicted RBP11.2□□□□□ -0.62
USF1-206ENST00000491629 FPR2P25090 351 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 GLO1Q04760 184 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 PUDPQ08623 228 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 MPP2Q14168 576 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 PCGF3Q3KNV8 242 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 ALG10BQ5I7T1 473 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 C5orf46Q6UWT4 87 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 PIWIL3Q7Z3Z3 882 aaKnown RBP11.2□□□□□ -0.62
USF1-206ENST00000491629 EGFL6Q8IUX8 553 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 C10orf67Q8IYJ2 551 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 MIER2Q8N344 545 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 SCAIQ8N9R8 606 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 OR6S1Q8NH40 331 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 WDR55Q9H6Y2 383 aaPredicted RBP11.2□□□□□ -0.62
USF1-206ENST00000491629 B3GAT2Q9NPZ5 323 aa11.2□□□□□ -0.62
USF1-206ENST00000491629 MRPL39Q9NYK5 338 aaKnown RBP11.2□□□□□ -0.62
USF1-206ENST00000491629 CLDN25C9JDP6 229 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 TRAPPC2LH3BP13 241 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 SERPINI2O75830 405 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 UBOX5O94941 541 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 IGHV1-46P01743 117 aa11.19□□□□□ -0.62
USF1-206ENST00000491629 IGHV3-13P01766 116 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms