RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ZNF726A6NNF4 738 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 ZNF724A8MTY0 619 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 AKAP8O43823 692 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 WBP4O75554 376 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 TRMUO75648 421 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 ZNF432O94892 652 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 YES1P07947 543 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 HOXD4P09016 255 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 C1orf185Q5T7R7 199 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 PLBD1Q6P4A8 553 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 C3P1Q6ZMU1 363 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 CXXC5Q7LFL8 322 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 BCDIN3DQ7Z5W3 292 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 DOLPP1Q86YN1 238 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 CPOQ8IVL8 374 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 C9orf106Q8NAJ2 232 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 OTULINQ96BN8 352 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 GMPPAQ96IJ6 420 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 OR2M2Q96R28 347 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 KCNK17Q96T54 332 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 MRPL13Q9BYD1 178 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 TINAGQ9UJW2 476 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 RCE1Q9Y256 329 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 MBD3L4A6NDZ8 208 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 MBD3L3A6NE82 208 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 MBD3L5A6NJ08 208 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 PRR23D1E9PI22 279 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 IGHG1P01857 330 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 PGA4P0DJD7 388 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 PGA3P0DJD8 388 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 PRR23D2P0DMB1 279 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 PAICSP22234 425 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 SELENOPP49908 381 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 DBPQ10586 325 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 CDK5R2Q13319 367 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 NIPAL3Q6P499 406 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 SEM1Q6ZVN7 128 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 ATCAYQ86WG3 371 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 RPRMLQ8N4K4 120 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 SYT14Q8NB59 555 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 MBD3L2Q8NHZ7 208 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 ZNF566Q969W8 418 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 TMEM45BQ96B21 275 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 SNX18Q96RF0 628 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 HCAR1Q9BXC0 346 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 SYT4Q9H2B2 425 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 MED20Q9H944 212 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 GLRX2Q9NS18 164 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 DNAJC27Q9NZQ0 273 aa19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 NOSIPQ9Y314 301 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-204ENST00000491402 PHF3Q92576 2039 aaKnown RBP19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 MYO18BQ8IUG5 2567 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 PYCARD-AS1I3L0S3 204 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 GNLYP22749 145 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 UQCRFS1P47985 274 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 TMEM201Q5SNT2 666 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 SLC25A30Q5SVS4 291 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 CARD17Q5XLA6 110 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 LAIR2Q6ISS4 152 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 GCNT2Q8N0V5 402 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 TMEM123Q8N131 208 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 NOXO1Q8NFA2 376 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 PTP4A1Q93096 173 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 TM9SF2Q99805 663 aa19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 RPRD1BQ9NQG5 326 aaKnown RBP19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 VSX1Q9NZR4 365 aaPredicted RBP19.28■□□□□ 0.68
VCPKMT-204ENST00000491402 FREM1Q5H8C1 2179 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 SLC22A23A1A5C7 686 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 RENP00797 406 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 AGTR1P30556 359 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 SMN1Q16637 294 aaKnown RBP19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 EIF2S3LQ2VIR3 472 aaKnown RBP19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 AADACL4Q5VUY2 407 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 NXNL2Q5VZ03 156 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 OR2A2Q6IF42 318 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 B3GNT6Q6ZMB0 384 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 AAED1Q7RTV5 226 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 BBS1Q8NFJ9 593 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 OR9Q1Q8NGQ5 310 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 OSGIN2Q9Y236 505 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 RELNP78509 3460 aa19.27■□□□□ 0.68
VCPKMT-204ENST00000491402 SS18L1O75177 396 aaPredicted RBP19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 ENTPD6O75354 484 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 CLUP10909 449 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 CLRN1P58418 232 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 OCLNQ16625 522 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 MEDAGQ5VYS4 303 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 ZNF582Q96NG8 517 aaPredicted RBP19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 TSSK2Q96PF2 358 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 ALG12Q9BV10 488 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 NMNAT2Q9BZQ4 307 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 CLN6Q9NWW5 311 aa19.27■□□□□ 0.67
VCPKMT-204ENST00000491402 CENPBD1B2RD01 187 aa19.26■□□□□ 0.67
VCPKMT-204ENST00000491402 AHCYL1O43865 530 aa19.26■□□□□ 0.67
VCPKMT-204ENST00000491402 MRPL33O75394 65 aaKnown RBP19.26■□□□□ 0.67
VCPKMT-204ENST00000491402 FMO3P31513 532 aa19.26■□□□□ 0.67
VCPKMT-204ENST00000491402 TEKQ02763 1124 aa19.26■□□□□ 0.67
VCPKMT-204ENST00000491402 GUSBP1Q15486 140 aa19.26■□□□□ 0.67
VCPKMT-204ENST00000491402 Q96MT0 163 aa19.26■□□□□ 0.67
VCPKMT-204ENST00000491402 SH3BGRL2Q9UJC5 107 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms