RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 GABARAPO95166 117 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 BCL10O95999 233 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 CELP19835 753 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 CLK1P49759 484 aaKnown RBP12.46□□□□□ -0.41
SMPD4-219ENST00000491128 C1DQ13901 141 aaKnown RBP12.46□□□□□ -0.41
SMPD4-219ENST00000491128 TMPPEQ6ZT21 453 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 SPATC1Q76KD6 591 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 ZNF519Q8TB69 540 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 NSMAFQ92636 917 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 C4orf36Q96KX1 117 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 SRXN1Q9BYN0 137 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 POTEKPQ9BYX7 375 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 ALKBH4Q9NXW9 302 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 NPIPA1Q9UND3 350 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 KLHDC2Q9Y2U9 406 aa12.46□□□□□ -0.41
SMPD4-219ENST00000491128 A0A087WV48 116 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 PRSS37A4D1T9 235 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 CCRL2O00421 344 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 IDH3BO43837 385 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 SCG5P05408 212 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 P2RY4P51582 365 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 DLX5P56178 289 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 RTP5Q14D33 572 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 ARMC4Q5T2S8 1044 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF322Q6U7Q0 402 aaPredicted RBP12.46□□□□□ -0.42
SMPD4-219ENST00000491128 PHC2Q8IXK0 858 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 EXD3Q8N9H8 876 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 PIGQQ9BRB3 760 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 TMED9Q9BVK6 235 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 TTTY12Q9BZ98 90 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 SLC6A15Q9H2J7 730 aa12.46□□□□□ -0.42
SMPD4-219ENST00000491128 EXOSC1Q9Y3B2 195 aaKnown RBP12.46□□□□□ -0.42
SMPD4-219ENST00000491128 HTR3EA5X5Y0 456 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 OR5H15A6NDH6 313 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 TLX3O43711 291 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-219ENST00000491128 TXNDC12O95881 172 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 SRD5A2P31213 254 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 CLDN15P56746 228 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 RPS25P62851 125 aaKnown RBP12.45□□□□□ -0.42
SMPD4-219ENST00000491128 PLGLB1Q02325 96 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 C3AR1Q16581 482 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 TMEM44Q2T9K0 475 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 VASNQ6EMK4 673 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 KLHL36Q8N4N3 616 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF485Q8NCK3 441 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF845Q96IR2 970 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-219ENST00000491128 CNN2Q99439 309 aaKnown RBP12.45□□□□□ -0.42
SMPD4-219ENST00000491128 PTTG2Q9NZH5 202 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 PCDHGB6Q9Y5F9 930 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 CORINQ9Y5Q5 1042 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 H3BSH0 61 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 GLCEO94923 617 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 RENP00797 406 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 SP1P08047 785 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 ADH6P28332 368 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 PSMB10P40306 273 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 EIF1AXP47813 144 aaKnown RBP12.45□□□□□ -0.42
SMPD4-219ENST00000491128 EEF1A1P5Q5VTE0 462 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 LRRC69Q6ZNQ3 347 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.45□□□□□ -0.42
SMPD4-219ENST00000491128 DPY19L4Q7Z388 723 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 SLC35F2Q8IXU6 374 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 THAP4Q8WY91 577 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 ROBO4Q8WZ75 1007 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 MIB2Q96AX9 1013 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 DTNBP1Q96EV8 351 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 ARHGAP9Q9BRR9 750 aa12.45□□□□□ -0.42
SMPD4-219ENST00000491128 COA3Q9Y2R0 106 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-219ENST00000491128 A0A087WZY1 265 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 TMEM129A0AVI4 362 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 SLC22A23A1A5C7 686 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 APEHP13798 732 aaKnown RBP12.44□□□□□ -0.42
SMPD4-219ENST00000491128 TGM4P49221 684 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 MEOX1P50221 254 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 LGALS3BPQ08380 585 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 RNFT1Q5M7Z0 435 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 GPR139Q6DWJ6 353 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 C5orf46Q6UWT4 87 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 SLC43A2Q8N370 569 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 OR6N2Q8NGY6 317 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 FAM173AQ9BQD7 235 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 HDHD5Q9BXW7 423 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 DEFB127Q9H1M4 99 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 DNAJC13O75165 2243 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 CXCL13O43927 109 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 CDC20Q12834 499 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 MFAP5Q13361 173 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 GALEQ14376 348 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 SLC25A25Q6KCM7 469 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 TMEM251Q8N6I4 163 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 ASB10Q8WXI3 467 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 AMELYQ99218 206 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 ZNF703Q9H7S9 590 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-219ENST00000491128 B3GALT5Q9Y2C3 310 aa12.44□□□□□ -0.42
SMPD4-219ENST00000491128 NCOR2Q9Y618 2525 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 RRADP55042 308 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 RAC1P63000 192 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 MXD1Q05195 221 aa12.43□□□□□ -0.42
SMPD4-219ENST00000491128 ANKDD1AQ495B1 522 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms