RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 FUNDC1Q8IVP5 155 aa15.29■□□□□ 0.04
YIPF3-208ENST00000490447 DUSP13Q9UII6 198 aa15.29■□□□□ 0.04
YIPF3-208ENST00000490447 ZNF346Q9UL40 294 aaKnown RBP15.29■□□□□ 0.04
YIPF3-208ENST00000490447 FZR1Q9UM11 496 aa15.29■□□□□ 0.04
YIPF3-208ENST00000490447 HPXP02790 462 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 SELENOVP59797 346 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 RAB39AQ14964 217 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 MAD2L1BPQ15013 274 aaPredicted RBP15.28■□□□□ 0.04
YIPF3-208ENST00000490447 NKPD1Q17RQ9 610 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 MSMPQ1L6U9 139 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 SMYD1Q8NB12 490 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 TLCD1Q96CP7 247 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 C7orf26Q96N11 449 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 ZNF75AQ96N20 296 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 MCHR1Q99705 422 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 ZNF224Q9NZL3 707 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 GRIP1Q9Y3R0 1128 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 GMEB1Q9Y692 573 aa15.28■□□□□ 0.04
YIPF3-208ENST00000490447 RNF13O43567 381 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 CHP2O43745 196 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 TPST2O60704 377 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 FARS2O95363 451 aaKnown RBP15.27■□□□□ 0.04
YIPF3-208ENST00000490447 TFP02787 698 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.04
YIPF3-208ENST00000490447 GPX2P18283 190 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 IDH3AP50213 366 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 SEC24CP53992 1094 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 FXNQ16595 210 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 ZNF613Q6PF04 617 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 SHQ1Q6PI26 577 aaKnown RBP15.27■□□□□ 0.04
YIPF3-208ENST00000490447 LRP11Q86VZ4 500 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 CLDND2Q8NHS1 167 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 LRRC8CQ8TDW0 803 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 ZNF566Q969W8 418 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 TMEM186Q96B77 213 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 EBF4Q9BQW3 602 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 CCDC28BQ9BUN5 200 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 IKZF5Q9H5V7 419 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 ZNF385DQ9H6B1 395 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 METTL17Q9H7H0 456 aaPredicted RBP15.27■□□□□ 0.04
YIPF3-208ENST00000490447 LPAR2Q9HBW0 351 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 TMBIM4Q9HC24 238 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 HIF1ANQ9NWT6 349 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 GLTPQ9NZD2 209 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 GPR160Q9UJ42 338 aa15.27■□□□□ 0.04
YIPF3-208ENST00000490447 SLC22A23A1A5C7 686 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 M0R3H8 397 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 PPIHO43447 177 aaKnown RBP15.26■□□□□ 0.03
YIPF3-208ENST00000490447 FMO6PO60774 539 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 MFN2O95140 757 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 SERPINA5P05154 406 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 OR8G3PP0DMU2 310 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 NAT2P11245 290 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 COL8A2P25067 703 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 TMEM33P57088 247 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 CYP51A1Q16850 503 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 ALKBH6Q3KRA9 238 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 AGKQ53H12 422 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 RGS7BPQ6MZT1 257 aaPredicted RBP15.26■□□□□ 0.03
YIPF3-208ENST00000490447 TTC33Q6PID6 262 aaPredicted RBP15.26■□□□□ 0.03
YIPF3-208ENST00000490447 SLC35D2Q76EJ3 337 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 MEX3DQ86XN8 651 aaKnown RBP15.26■□□□□ 0.03
YIPF3-208ENST00000490447 WDFY1Q8IWB7 410 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 SKA3Q8IX90 412 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 SLC22A24Q8N4F4 322 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 C11orf65Q8NCR3 313 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 OR51F2Q8NH61 342 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 OR6X1Q8NH79 312 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 SNX33Q8WV41 574 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 WFDC6Q9BQY6 131 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 ZNF416Q9BWM5 594 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 RNF121Q9H920 327 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 NANSQ9NR45 359 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 ZNF275Q9NSD4 429 aaPredicted RBP15.26■□□□□ 0.03
YIPF3-208ENST00000490447 ZNF446Q9NWS9 450 aa15.26■□□□□ 0.03
YIPF3-208ENST00000490447 MYEF2Q9P2K5 600 aaKnown RBP15.26■□□□□ 0.03
YIPF3-208ENST00000490447 TRBV5-3A0A0A0MS03 114 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 A0A0A6YYJ9 748 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 CPSF4LA6NMK7 179 aaKnown RBP15.25■□□□□ 0.03
YIPF3-208ENST00000490447 MSMBP08118 114 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 PATE4P0C8F1 98 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 MRPS11P82912 194 aaKnown RBP15.25■□□□□ 0.03
YIPF3-208ENST00000490447 ENTPD8Q5MY95 495 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 TMEM53Q6P2H8 277 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 NHLRC1Q6VVB1 395 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 C12orf54Q6X4T0 127 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 CARM1Q86X55 608 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 ZNF584Q8IVC4 421 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 SLC30A7Q8NEW0 376 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 TMEM54Q969K7 222 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 ARHGDIGQ99819 225 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 C1orf198Q9H425 327 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 CDH20Q9HBT6 801 aa15.25■□□□□ 0.03
YIPF3-208ENST00000490447 KPNA4O00629 521 aaPredicted RBP15.24■□□□□ 0.03
YIPF3-208ENST00000490447 CH25HO95992 272 aa15.24■□□□□ 0.03
YIPF3-208ENST00000490447 PTHP01270 115 aa15.24■□□□□ 0.03
YIPF3-208ENST00000490447 OPN1SWP03999 348 aa15.24■□□□□ 0.03
YIPF3-208ENST00000490447 HIST1H2ABP04908 130 aa15.24■□□□□ 0.03
YIPF3-208ENST00000490447 FAM157BP0CG42 384 aa15.24■□□□□ 0.03
YIPF3-208ENST00000490447 UMPSP11172 480 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms