RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 LMO4P61968 165 aa13.59□□□□□ -0.23
PLOD3-216ENST00000489927 ALKBH6Q3KRA9 238 aa13.59□□□□□ -0.23
PLOD3-216ENST00000489927 LRIF1Q5T3J3 769 aa13.59□□□□□ -0.23
PLOD3-216ENST00000489927 FAHD2BQ6P2I3 314 aaPredicted RBP13.59□□□□□ -0.23
PLOD3-216ENST00000489927 SHQ1Q6PI26 577 aaKnown RBP13.59□□□□□ -0.23
PLOD3-216ENST00000489927 WDR88Q6ZMY6 472 aa13.59□□□□□ -0.23
PLOD3-216ENST00000489927 FAHD2AQ96GK7 314 aa13.59□□□□□ -0.23
PLOD3-216ENST00000489927 ZNF385DQ9H6B1 395 aa13.59□□□□□ -0.23
PLOD3-216ENST00000489927 SLC7A8Q9UHI5 535 aa13.59□□□□□ -0.23
PLOD3-216ENST00000489927 FBXL3Q9UKT7 428 aa13.59□□□□□ -0.23
PLOD3-216ENST00000489927 SERPINA5P05154 406 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 AQP1P29972 269 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 LSP1P33241 339 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 MAGEB1P43366 347 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 BIDP55957 195 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 ACTG1P63261 375 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 SCGB2A2Q13296 93 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 C1orf229Q6ZS94 237 aaPredicted RBP13.58□□□□□ -0.24
PLOD3-216ENST00000489927 PIWIL3Q7Z3Z3 882 aaKnown RBP13.58□□□□□ -0.24
PLOD3-216ENST00000489927 CROCCP2Q86T23 111 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF418Q8TF45 676 aaPredicted RBP13.58□□□□□ -0.24
PLOD3-216ENST00000489927 TMEM54Q969K7 222 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 TMEM43Q9BTV4 400 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF416Q9BWM5 594 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 IKZF5Q9H5V7 419 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 VAPAQ9P0L0 249 aa13.58□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF346Q9UL40 294 aaKnown RBP13.58□□□□□ -0.24
PLOD3-216ENST00000489927 TRAV20A0A0B4J274 112 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 PRORSD1PA6NEY8 169 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 C11orf98E9PRG8 122 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 WIPF1O43516 503 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 SPRY1O43609 319 aaPredicted RBP13.57□□□□□ -0.24
PLOD3-216ENST00000489927 CDC14BO60729 498 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 CLPTM1O96005 669 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 PNPP00491 289 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 FAM157BP0CG42 384 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 ADORA3P0DMS8 318 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 COMPP49747 757 aaPredicted RBP13.57□□□□□ -0.24
PLOD3-216ENST00000489927 SCARB2Q14108 478 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 NKPD1Q17RQ9 610 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 PAGE3Q5JUK9 113 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 SWT1Q5T5J6 900 aaKnown RBP13.57□□□□□ -0.24
PLOD3-216ENST00000489927 RGS7BPQ6MZT1 257 aaPredicted RBP13.57□□□□□ -0.24
PLOD3-216ENST00000489927 EPGNQ6UW88 154 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 RANBP3LQ86VV4 465 aaPredicted RBP13.57□□□□□ -0.24
PLOD3-216ENST00000489927 FUNDC1Q8IVP5 155 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 SLC22A24Q8N4F4 322 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 PAQR4Q8N4S7 273 aaPredicted RBP13.57□□□□□ -0.24
PLOD3-216ENST00000489927 OR5J2Q8NH18 312 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 TSPAN32Q96QS1 320 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 GLTPQ9NZD2 209 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 TAAR3PQ9P1P4 343 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 SLC13A4Q9UKG4 626 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 PCDHB10Q9UN67 800 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 GMEB1Q9Y692 573 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 USH1CQ9Y6N9 552 aa13.57□□□□□ -0.24
PLOD3-216ENST00000489927 MEGF8Q7Z7M0 2845 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 MT-ATP6P00846 226 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 AVPP01185 164 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 CCL2P13500 99 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 SLC6A2P23975 617 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 MRPL19P49406 292 aaKnown RBP13.56□□□□□ -0.24
PLOD3-216ENST00000489927 SLC18A1P54219 525 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 HILS1P60008 231 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 STX1BP61266 288 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 CCL8P80075 99 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 MYBPC1Q00872 1141 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 AVPI1Q5T686 147 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 LRFN4Q6PJG9 635 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 BLOC1S3Q6QNY0 202 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 LINC00114Q6XXX2 140 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 SLC35D2Q76EJ3 337 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 ARMC8Q8IUR7 673 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 SLC30A7Q8NEW0 376 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 BHLHE22Q8NFJ8 381 aaPredicted RBP13.56□□□□□ -0.24
PLOD3-216ENST00000489927 OR6X1Q8NH79 312 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 FAM216AQ8WUB2 273 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 ZNF607Q96SK3 696 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 SH3GL3Q99963 347 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 OR51B6Q9H340 312 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 TMEM38AQ9H6F2 299 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 SLC52A3Q9NQ40 469 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 G6PC2Q9NQR9 355 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 TMEM38BQ9NVV0 291 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 CCDC167Q9P0B6 97 aa13.56□□□□□ -0.24
PLOD3-216ENST00000489927 IGLV3-9A0A075B6K5 115 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 LOC105371242A0A075B767 164 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 TRBV5-3A0A0A0MS03 114 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 C17orf100A8MU93 164 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 SERPINB7O75635 380 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 MFN2O95140 757 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 OR6A2O95222 327 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 OR8G3PP0DMU2 310 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 EPHA1P21709 976 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 PPIBP23284 216 aaKnown RBP13.55□□□□□ -0.24
PLOD3-216ENST00000489927 KLF3P57682 345 aaPredicted RBP13.55□□□□□ -0.24
PLOD3-216ENST00000489927 ERVS71-1P61550 626 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 MVKQ03426 396 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 TMEM154Q6P9G4 183 aa13.55□□□□□ -0.24
PLOD3-216ENST00000489927 USP43Q70EL4 1123 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms