RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 MTCH2Q9Y6C9 303 aa4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 NYNRINQ9P2P1 1898 aaKnown RBP4.36□□□□□ -1.71
SNRNP40-206ENST00000489853 CCDC88CQ9P219 2028 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 LOC285556D6RIA3 1793 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 TDRD15B5MCY1 1934 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 GNG14A0A1W2PPG7 69 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 GXYLT2A0PJZ3 443 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3BA6NDS4 549 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF726A6NNF4 738 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 SHISA8B8ZZ34 492 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF587BE7ETH6 402 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 H7BY64 318 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 DVL1O14640 695 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ITGB1BP1O14713 200 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 OGG1O15527 345 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 CD1AP06126 327 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 SFTPBP07988 381 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 SNRPCP09234 159 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3HP0C7X1 549 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 CALCBP10092 127 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 CLUP10909 449 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 C6P13671 934 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 RAC2P15153 192 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM11P17152 192 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 NT5EP21589 574 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 GABRR1P24046 479 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 IL2RGP31785 369 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 MPIP34949 423 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC6A9P48067 706 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 RGS8P57771 180 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 PPP2CBP62714 309 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 PPP2CAP67775 309 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 RAE1P78406 368 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF235Q14590 738 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 GPNMBQ14956 572 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC10A1Q14973 349 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 SCGB2B2Q4G0G5 96 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM35AQ53FP2 167 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ACTBL2Q562R1 376 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 KHDC3LQ587J8 217 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 AWAT1Q58HT5 328 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 DCAF10Q5QP82 559 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 TBC1D3GQ6DHY5 549 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 AWAT2Q6E213 333 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 PLBD1Q6P4A8 553 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 LCTLQ6UWM7 567 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 BTNL8Q6UX41 500 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 UNQ9370/PRO34162Q6UXP9 181 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 LANCL3Q6ZV70 420 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 MEPCEQ7L2J0 689 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 TAS1R1Q7RTX1 841 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 RBM45Q8IUH3 476 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 APCDD1Q8J025 514 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 COMMD1Q8N668 190 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 MORN4Q8NDC4 146 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 REPS2Q8NFH8 660 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 OR10AD1Q8NGE0 317 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 OR4C16Q8NGL9 310 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 OR1J2Q8NGS2 313 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 OR2L8Q8NGY9 312 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 NUBPLQ8TB37 319 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 GHSRQ92847 366 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ISOC2Q96AB3 205 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 HAVCR1Q96D42 359 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 YPEL4Q96NS1 127 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF607Q96SK3 696 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 SEPT5Q99719 369 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC25A21Q9BQT8 299 aaPredicted RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 DDA1Q9BW61 102 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 FOXQ1Q9C009 403 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 CHST6Q9GZX3 395 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 CXCL16Q9H2A7 254 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 MS4A5Q9H3V2 200 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 EGLN3Q9H6Z9 239 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 CWH43Q9H720 699 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 EXO5Q9H790 373 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 FN3KRPQ9HA64 309 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 BRF2Q9HAW0 419 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 NRIP3Q9NQ35 241 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 CYTL1Q9NRR1 136 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ARL15Q9NXU5 204 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 MTFP1Q9UDX5 166 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 MRPS18CQ9Y3D5 142 aaKnown RBP4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF337Q9Y3M9 751 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 RALGAPA2Q2PPJ7 1873 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 ZSWIM8A7E2V4 1837 aa4.35□□□□□ -1.71
SNRNP40-206ENST00000489853 TRBV6-7A0A0A0MS04 114 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 TMEM269A0A1B0GVZ9 245 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SLC5A10A0PJK1 596 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SMCO3A2RU48 225 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 FAM183AA6NL82 134 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 IFITM5A6NNB3 132 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PRSS47A8MTI9 375 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 A8MXE2 369 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 C9JQL5 133 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 M0R036 132 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 PHOX2AO14813 284 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 SEPT4O43236 478 aa4.34□□□□□ -1.71
SNRNP40-206ENST00000489853 ZNF208O43345 1280 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms