RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 C20orf85Q9H1P6 137 aa2.36□□□□□ -2.03
AC055855.1-201ENST00000489563 NXF3Q9H4D5 531 aaKnown RBP2.36□□□□□ -2.03
AC055855.1-201ENST00000489563 YY1AP1Q9H869 796 aa2.36□□□□□ -2.03
AC055855.1-201ENST00000489563 KCNIP1Q9NZI2 227 aa2.36□□□□□ -2.03
AC055855.1-201ENST00000489563 NEUROG3Q9Y4Z2 214 aa2.36□□□□□ -2.03
AC055855.1-201ENST00000489563 CACNG2Q9Y698 323 aa2.36□□□□□ -2.03
AC055855.1-201ENST00000489563 CCDC88BA6NC98 1476 aa2.36□□□□□ -2.03
AC055855.1-201ENST00000489563 REREQ9P2R6 1566 aa2.36□□□□□ -2.03
AC055855.1-201ENST00000489563 HERC2O95714 4834 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 MIA2Q96PC5 1412 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 TGP01266 2768 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 COL1A1P02452 1464 aaPredicted RBP2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 E9PBE3 544 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 LOC110117498-PIK3R3F6TDL0 507 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 GOLGA8SH3BPF8 625 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 PRKAB2O43741 272 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 RAMP3O60896 148 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 INSP01308 110 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 IL1BP01584 269 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 KRT6AP02538 564 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 IGHV4-34P06331 123 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF17P17021 662 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 IL12AP29459 219 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 FMO3P31513 532 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 CEBPDP49716 269 aaPredicted RBP2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 DUSP3P51452 185 aaPredicted RBP2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ATP1B3P54709 279 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 SH3BGRP55822 239 aaPredicted RBP2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 DLX1P56177 255 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 UBE2HP62256 183 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF763Q0D2J5 394 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 IL24Q13007 206 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 UNC119Q13432 240 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 MPPED2Q15777 294 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ATP6AP1Q15904 470 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF658BQ4V348 819 aaPredicted RBP2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 CASC10Q5T4H9 136 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 PRSS41Q7RTY9 318 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 MFSD6LQ8IWD5 586 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 FAM71E2Q8N5Q1 922 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ACOT4Q8N9L9 421 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 FNDC5Q8NAU1 212 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 MAGEE2Q8TD90 523 aaPredicted RBP2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ARPC1AQ92747 370 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 C10orf35Q96D05 121 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF414Q96IQ9 312 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 PSKH2Q96QS6 385 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 SLC39A3Q9BRY0 314 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 HES7Q9BYE0 225 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 RNF167Q9H6Y7 350 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 LRRC40Q9H9A6 602 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 MCCC2Q9HCC0 563 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF225Q9UK10 706 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ADAM28Q9UKQ2 775 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 SBF1O95248 1867 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 PAPPAQ13219 1627 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 ABCA6Q8N139 1617 aa2.35□□□□□ -2.03
AC055855.1-201ENST00000489563 AKAP11Q9UKA4 1901 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 SPATA31E1Q6ZUB1 1445 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 ERBINQ96RT1 1412 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 CLRN2A0PK11 232 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 A6NDX4 124 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 TRAF3IP2O43734 574 aaPredicted RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 FAM189A1O60320 539 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 TNFSF13O75888 250 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 CHTF8P0CG12 524 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 ICAM2P13598 275 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 MDKP21741 143 aaPredicted RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 CCNCP24863 283 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 CSNK1DP48730 415 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 CRYBB1P53674 252 aaPredicted RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 KRTAP12-2P59991 146 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 OR5I1Q13606 314 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 FILIP1LQ4L180 1135 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 GPR157Q5UAW9 335 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 CENPPQ6IPU0 288 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF620Q6ZNG0 422 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 RFLNAQ6ZTI6 216 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 EFL1Q7Z2Z2 1120 aaKnown RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 DHDDSQ86SQ9 333 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 PAQR7Q86WK9 346 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 RALGPS2Q86X27 583 aaPredicted RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 PLA2G4DQ86XP0 818 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 ZCCHC7Q8N3Z6 543 aaKnown RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 EIF1ADQ8N9N8 165 aaKnown RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 Q8N9W7 124 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 BHLHE23Q8NDY6 225 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 NDRG1Q92597 394 aaKnown RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF799Q96GE5 643 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 SLC41A3Q96GZ6 507 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 TCEANC2Q96MN5 208 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 OXGR1Q96P68 337 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 NT5C3AQ9H0P0 336 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 SIAEQ9HAT2 523 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 NUFIP1Q9UHK0 495 aaKnown RBP2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 KCNIP3Q9Y2W7 256 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 UGGT1Q9NYU2 1555 aa2.34□□□□□ -2.03
AC055855.1-201ENST00000489563 THSD7AQ9UPZ6 1657 aa2.34□□□□□ -2.04
AC055855.1-201ENST00000489563 TRPM3Q9HCF6 1732 aaPredicted RBP2.34□□□□□ -2.04
AC055855.1-201ENST00000489563 FMN2Q9NZ56 1722 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms