RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ENTPD5O75356 428 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 PDE5AO76074 875 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 GADD45GO95257 159 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 PGA4P0DJD7 388 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 PGA3P0DJD8 388 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 CLRN1P58418 232 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 MS4A2Q01362 244 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 C3orf36Q3SXR2 165 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 ARMC4Q5T2S8 1044 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 LRFN4Q6PJG9 635 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 ZDHHC21Q8IVQ6 265 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
MDC1-206ENST00000489540 OR52J3Q8NH60 311 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 ASB10Q8WXI3 467 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 FBXW5Q969U6 566 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 CCL19Q99731 98 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 MRPL13Q9BYD1 178 aaKnown RBP15.16■□□□□ 0.02
MDC1-206ENST00000489540 NDEL1Q9GZM8 345 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 CXXC4Q9H2H0 198 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 NELFAQ9H3P2 528 aa15.16■□□□□ 0.02
MDC1-206ENST00000489540 PRR14LQ5THK1 2151 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 TRAV27A0A087WT01 109 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 TRBV4-1A0A0J9YWV2 114 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 SHISA9B4DS77 424 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 TRMUO75648 421 aaKnown RBP15.15■□□□□ 0.02
MDC1-206ENST00000489540 ACADSP16219 412 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 ATP6V1B2P21281 511 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 GPR4P46093 362 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 CTXN1P60606 82 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 SPIBQ01892 262 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 TRAP1Q12931 704 aaKnown RBP15.15■□□□□ 0.02
MDC1-206ENST00000489540 HIST3H3Q16695 136 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 ZBED5Q49AG3 693 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 SLC22A25Q6T423 547 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 SPNS3Q6ZMD2 512 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 MEX3DQ86XN8 651 aaKnown RBP15.15■□□□□ 0.02
MDC1-206ENST00000489540 LRRC75AQ8NAA5 344 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 KBTBD8Q8NFY9 601 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 OR4K5Q8NGD3 323 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 LRGUKQ96M69 825 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 SEPHS2Q99611 448 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 FOXB1Q99853 325 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 FUZQ9BT04 418 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 MAGIXQ9H6Y5 334 aa15.15■□□□□ 0.02
MDC1-206ENST00000489540 CISD1Q9NZ45 108 aaKnown RBP15.15■□□□□ 0.02
MDC1-206ENST00000489540 CRNNQ9UBG3 495 aaPredicted RBP15.15■□□□□ 0.02
MDC1-206ENST00000489540 MYO9AB2RTY4 2548 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 TCRBV5S2A0A599 114 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 SH3PXD2BA1X283 911 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 CDC42EP2O14613 210 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 DHHO43323 396 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 KRT36O76013 467 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 QDPRP09417 244 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 NR2C1P13056 603 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 CBR1P16152 277 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 ARR3P36575 388 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 OMPP47874 163 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 RPL27P61353 136 aaKnown RBP15.14■□□□□ 0.01
MDC1-206ENST00000489540 RUNX1T1Q06455 604 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 FHL1Q13642 323 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 FAM205BPQ63HN1 556 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 ZNF813Q6ZN06 617 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 OR13C2Q8NGS9 318 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 SMAP2Q8WU79 429 aaPredicted RBP15.14■□□□□ 0.01
MDC1-206ENST00000489540 FAM46AQ96IP4 442 aaKnown RBP15.14■□□□□ 0.01
MDC1-206ENST00000489540 CLPTM1LQ96KA5 538 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 SLC38A2Q96QD8 506 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 BTBD10Q9BSF8 475 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 TRIM15Q9C019 465 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 POU2F3Q9UKI9 436 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 ZNF346Q9UL40 294 aaKnown RBP15.14■□□□□ 0.01
MDC1-206ENST00000489540 TMCC3Q9ULS5 477 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 AURKCQ9UQB9 309 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 ALPK2Q86TB3 2170 aa15.14■□□□□ 0.01
MDC1-206ENST00000489540 ANKRD17O75179 2603 aaKnown RBP15.14■□□□□ 0.01
MDC1-206ENST00000489540 SMPD2O60906 423 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 PTP4A3O75365 173 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 IGHMP01871 453 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 RRM2P31350 389 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 IFNGR2P38484 337 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 CAPZA2P47755 286 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 LIMS1P48059 325 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 CDH11P55287 796 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 CHRNB3Q05901 458 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 BNIP1Q12981 228 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 SEC23BQ15437 767 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 FAM98BQ52LJ0 330 aaKnown RBP15.13■□□□□ 0.01
MDC1-206ENST00000489540 NOXO1Q8NFA2 376 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 FNDC8Q8TC99 324 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 TMEM171Q8WVE6 324 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 NANOS1Q8WY41 292 aaKnown RBP15.13■□□□□ 0.01
MDC1-206ENST00000489540 NEUROG1Q92886 237 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 MCHR2Q969V1 340 aa15.13■□□□□ 0.01
MDC1-206ENST00000489540 CCDC124Q96CT7 223 aaKnown RBP15.13■□□□□ 0.01
MDC1-206ENST00000489540 SLC7A6OSQ96CW6 309 aaPredicted RBP15.13■□□□□ 0.01
MDC1-206ENST00000489540 DENND2DQ9H6A0 471 aaPredicted RBP15.13■□□□□ 0.01
MDC1-206ENST00000489540 ROS1P08922 2347 aa15.12■□□□□ 0.01
MDC1-206ENST00000489540 IGHV1-18A0A0C4DH31 117 aa15.12■□□□□ 0.01
MDC1-206ENST00000489540 A6NIZ1 184 aa15.12■□□□□ 0.01
MDC1-206ENST00000489540 ACOT8O14734 319 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms