RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PTP4A3O75365 173 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 TRMUO75648 421 aaKnown RBP12.65□□□□□ -0.38
HLA-F-229ENST00000489502 PPP1R3DO95685 299 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 GASTP01350 101 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 PPP3CBP16298 524 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 ACVR1BP36896 505 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 PRPS1P60891 318 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 ACTR3P61158 418 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 RPL27P61353 136 aaKnown RBP12.65□□□□□ -0.38
HLA-F-229ENST00000489502 LCN6P62502 163 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 FMODQ06828 376 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 CD47Q08722 323 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 TSPAN31Q12999 210 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 ZSCAN26Q16670 478 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 MICAQ29983 383 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 SMARCD3Q6STE5 483 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 SEZ6L2Q6UXD5 910 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 YTHDF3Q7Z739 585 aaKnown RBP12.65□□□□□ -0.38
HLA-F-229ENST00000489502 TMEM200AQ86VY9 491 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 OR1K1Q8NGR3 316 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 OR52N5Q8NH56 324 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 GIPC3Q8TF64 312 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 PYDC1Q8WXC3 89 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 HDAC2Q92769 488 aaKnown RBP12.65□□□□□ -0.38
HLA-F-229ENST00000489502 TMEM54Q969K7 222 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 RASD2Q96D21 266 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 Q96M85 177 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 ZNF570Q96NI8 536 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 NDEL1Q9GZM8 345 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 OR10A4Q9H209 315 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 OR52D1Q9H346 318 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 NELFAQ9H3P2 528 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 EGLN3Q9H6Z9 239 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 SLC24A3Q9HC58 644 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 B3GAT2Q9NPZ5 323 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 ZNF346Q9UL40 294 aaKnown RBP12.65□□□□□ -0.38
HLA-F-229ENST00000489502 AP4S1Q9Y587 144 aa12.65□□□□□ -0.38
HLA-F-229ENST00000489502 TEX13CA0A0J9YWL9 993 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 DEFB108AA8MXU0 73 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 RPL36A-HNRNPH2H7BZ11 118 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 DEAF1O75398 565 aaPredicted RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 SOX14O95416 240 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 SLC2A10O95528 541 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 CD14P08571 375 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 IGFBP1P08833 259 aaPredicted RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 ACADSP16219 412 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 CRYGSP22914 178 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 TUBA1BP68363 451 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 TUBA4AP68366 448 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 ARF1P84077 181 aaKnown RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 TGFBR3Q03167 851 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 KRR1Q13601 381 aaKnown RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 PPA1Q15181 289 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 ATP6AP1Q15904 470 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 TBRG1Q3YBR2 411 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 MESTQ5EB52 335 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 TUBA1AQ71U36 451 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 HDDC2Q7Z4H3 204 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 LINC00471Q8N535 108 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 OR8D4Q8NGM9 314 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 HTRA1Q92743 480 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 C14orf79Q96F83 325 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 LRR1Q96L50 414 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 SAMD8Q96LT4 415 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 RAB3IPQ96QF0 476 aaPredicted RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 GPX7Q96SL4 187 aaPredicted RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 NIPSNAP1Q9BPW8 284 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 PLA2G12AQ9BZM1 189 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 DENND2DQ9H6A0 471 aaPredicted RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 NTN4Q9HB63 628 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 ARMC1Q9NVT9 282 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 ZNF226Q9NYT6 803 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 GLTPQ9NZD2 209 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 PDP1Q9P0J1 537 aaPredicted RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 MAGED1Q9Y5V3 778 aaPredicted RBP12.64□□□□□ -0.39
HLA-F-229ENST00000489502 CDH10Q9Y6N8 788 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 CADP27708 2225 aa12.64□□□□□ -0.39
HLA-F-229ENST00000489502 ROS1P08922 2347 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 CYSRT1A8MQ03 144 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 ANKRD65E5RJM6 399 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 SOCS2O14508 198 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 CASKO14936 926 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 B4GALT1P15291 398 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 SSTR2P30874 369 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 HOXC12P31275 282 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 SLC6A6P31641 620 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 SH3BGRP55822 239 aaPredicted RBP12.63□□□□□ -0.39
HLA-F-229ENST00000489502 GK3PQ14409 553 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 TAF11Q15544 211 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 CLEC12AQ5QGZ9 265 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 TIMM23BQ5SRD1 257 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 FAM205BPQ63HN1 556 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 OR7E24Q6IFN5 339 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 LRFN4Q6PJG9 635 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 KLHL24Q6TFL4 600 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 FAM122BQ7Z309 247 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 AMIGO2Q86SJ2 522 aa12.63□□□□□ -0.39
HLA-F-229ENST00000489502 WDR31Q8NA23 367 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms