RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 VSIG4Q9Y279 399 aa3.09□□□□□ -1.91
XRN1-213ENST00000489241 THSD7BQ9C0I4 1608 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 TRBV9A0A0B4J1U6 114 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 A0A0J9YXY3 114 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 DYNC1I1O14576 645 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 TNFSF11O14788 317 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 CLPXO76031 633 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 CLIC3O95833 236 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 POLR2MP0CAP2 368 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 MYL2P10916 166 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 BCKDHBP21953 392 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 TUBG1P23258 451 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 FMO3P31513 532 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 GPR6P46095 362 aaPredicted RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 SLC11A1P49279 550 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 TAS2R19P59542 299 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 EIF3EP60228 445 aaKnown RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 IGLV3-21P80748 117 aaPredicted RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 KLHL40Q2TBA0 621 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 HSDL1Q3SXM5 330 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 HIKESHIQ53FT3 197 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 EOGTQ5NDL2 527 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 PPM1LQ5SGD2 360 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 CASC10Q5T4H9 136 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 AGBL2Q5U5Z8 902 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 TWF2Q6IBS0 349 aaKnown RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 ANGPTL8Q6UXH0 198 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 MMAAQ8IVH4 418 aaKnown RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 MICU2Q8IYU8 434 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 IQCKQ8N0W5 287 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 C14orf178Q8N769 122 aaPredicted RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 HSD17B11Q8NBQ5 300 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 VN1R2Q8NFZ6 395 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 RHEBL1Q8TAI7 183 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 GLYATL2Q8WU03 294 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 MARC2Q969Z3 335 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 ZNF707Q96C28 371 aaPredicted RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 MED8Q96G25 268 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 FCRL1Q96LA6 429 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 GSDMAQ96QA5 445 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 KCTD14Q9BQ13 255 aaPredicted RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 HES7Q9BYE0 225 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 RANBP3Q9H6Z4 567 aaPredicted RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 FANCEQ9HB96 536 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 TMEM165Q9HC07 324 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 TUBG2Q9NRH3 451 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 MRPL22Q9NWU5 206 aaKnown RBP3.08□□□□□ -1.92
XRN1-213ENST00000489241 MSH6P52701 1360 aa3.08□□□□□ -1.92
XRN1-213ENST00000489241 ARPC4-TTLL3A0A0A6YYG9 625 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 PSMB11A5LHX3 300 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 C12orf71A8MTZ7 269 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 KRTAP4-16G5E9R7 235 aaPredicted RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 NDUFAB1O14561 156 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 MRPS12O15235 138 aaKnown RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 HUS1O60921 280 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 FOXN2P32314 431 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 SLC1A1P43005 524 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 CX3CR1P49238 355 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 SSR4P51571 173 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 SUB1P53999 127 aaKnown RBP eCLIP3.07□□□□□ -1.92
XRN1-213ENST00000489241 UGT2B15P54855 530 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 GPNMBQ14956 572 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 CYTH1Q15438 398 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 TTC19Q6DKK2 380 aaPredicted RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 CTRB2Q6GPI1 263 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 ANKRD26P1Q6NSI1 321 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 CNIH2Q6PI25 160 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 SCARA5Q6ZMJ2 495 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 THOC6Q86W42 341 aaKnown RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 CMTM1Q8IZ96 169 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 PDIK1LQ8N165 341 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 PNKDQ8N490 385 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 ZADH2Q8N4Q0 377 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 OR52K1Q8NGK4 314 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 SLC7A13Q8TCU3 470 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 FRAT1Q92837 279 aaPredicted RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 SGK3Q96BR1 496 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 DUS3LQ96G46 650 aaKnown RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 C16orf74Q96GX8 76 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 PKNOX2Q96KN3 472 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 SRMSQ9H3Y6 488 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 SIAEQ9HAT2 523 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 CCNB1IP1Q9NPC3 277 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 TNFRSF19Q9NS68 423 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 XCL2Q9UBD3 114 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 UXTQ9UBK9 157 aaPredicted RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 PEF1Q9UBV8 284 aaKnown RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 NAP1L2Q9ULW6 460 aaPredicted RBP3.07□□□□□ -1.92
XRN1-213ENST00000489241 NEUROG3Q9Y4Z2 214 aa3.07□□□□□ -1.92
XRN1-213ENST00000489241 KCNE1BA0A087WTH5 132 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 IGKV1D-13A0A0B4J2D9 117 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 KBTBD11-OT1A0A1B0GTJ5 212 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 ZNF726A6NNF4 738 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 CDC7O00311 574 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 EIF4E2O60573 245 aaKnown RBP3.06□□□□□ -1.92
XRN1-213ENST00000489241 EEDO75530 441 aaKnown RBP3.06□□□□□ -1.92
XRN1-213ENST00000489241 EIF3GO75821 320 aaKnown RBP eCLIP3.06□□□□□ -1.92
XRN1-213ENST00000489241 ALDOBP05062 364 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 CHTF8P0CG12 524 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 IGKV1-13P0DP09 117 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms