RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 GUSBP1Q15486 140 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 HIST3H3Q16695 136 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 RTL6Q6ICC9 239 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF585AQ6P3V2 769 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 PLXDC2Q6UX71 529 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 CPOQ8IVL8 374 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 TMEM123Q8N131 208 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 CYB561A3Q8NBI2 242 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 MBD3L2Q8NHZ7 208 aaPredicted RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 FNDC8Q8TC99 324 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 NMD3Q96D46 503 aaKnown RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 GMPPAQ96IJ6 420 aaPredicted RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 LRR1Q96L50 414 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF582Q96NG8 517 aaPredicted RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 OR2M2Q96R28 347 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 TRIB1Q96RU8 372 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 EMC6Q9BV81 110 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 YTHDF1Q9BYJ9 559 aaKnown RBP14.22□□□□□ -0.13
CLDN11-208ENST00000488989 PLCXD1Q9NUJ7 323 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 CLN6Q9NWW5 311 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 POLEQ07864 2286 aa14.22□□□□□ -0.13
CLDN11-208ENST00000488989 SLC22A23A1A5C7 686 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 FAM183AA6NL82 134 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF726A6NNF4 738 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 PRRG2O14669 202 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 PRODHO43272 600 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 SS18L1O75177 396 aaPredicted RBP14.21□□□□□ -0.13
CLDN11-208ENST00000488989 ENTPD6O75354 484 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 IGHG1P01857 330 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 YES1P07947 543 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 CCDC159P0C7I6 412 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 SLC2A5P22732 501 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 ZNF133P52736 654 aaPredicted RBP14.21□□□□□ -0.13
CLDN11-208ENST00000488989 CSNK2BP67870 215 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 NFATC3Q12968 1075 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 TMED1Q13445 227 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 C1orf185Q5T7R7 199 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 NIPAL3Q6P499 406 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 PLBD1Q6P4A8 553 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 SEM1Q6ZVN7 128 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 P4HA3Q7Z4N8 544 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 GID4Q8IVV7 300 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 TUSC5Q8IXB3 177 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 NOXO1Q8NFA2 376 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 TMEM54Q969K7 222 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 INTS12Q96CB8 462 aaKnown RBP14.21□□□□□ -0.13
CLDN11-208ENST00000488989 NR1H4Q96RI1 486 aaPredicted RBP14.21□□□□□ -0.13
CLDN11-208ENST00000488989 HCAR1Q9BXC0 346 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 TP63Q9H3D4 680 aaPredicted RBP14.21□□□□□ -0.13
CLDN11-208ENST00000488989 DNAJC27Q9NZQ0 273 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 FOXD3Q9UJU5 478 aaPredicted RBP14.21□□□□□ -0.13
CLDN11-208ENST00000488989 FAM215AQ9Y5M1 114 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 FKBP7Q9Y680 259 aa14.21□□□□□ -0.13
CLDN11-208ENST00000488989 SLC1A7O00341 560 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 SLC19A2O60779 497 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 FMO3P31513 532 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 SELENOPP49908 381 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 CAMK2DQ13557 499 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 SMN1Q16637 294 aaKnown RBP14.2□□□□□ -0.14
CLDN11-208ENST00000488989 SLC35D3Q5M8T2 416 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 RBM48Q5RL73 367 aaKnown RBP14.2□□□□□ -0.14
CLDN11-208ENST00000488989 OR2A2Q6IF42 318 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 RPTNQ6XPR3 784 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 AAED1Q7RTV5 226 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 BCDIN3DQ7Z5W3 292 aaKnown RBP14.2□□□□□ -0.14
CLDN11-208ENST00000488989 ZBTB46Q86UZ6 589 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 DOLPP1Q86YN1 238 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 MCEMP1Q8IX19 187 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 C20orf196Q8IYI0 205 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 C9orf106Q8NAJ2 232 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 BBS1Q8NFJ9 593 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 TM9SF2Q99805 663 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 SYT4Q9H2B2 425 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 MED20Q9H944 212 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 MRPS18AQ9NVS2 196 aaKnown RBP14.2□□□□□ -0.14
CLDN11-208ENST00000488989 PARPBPQ9NWS1 579 aa14.2□□□□□ -0.14
CLDN11-208ENST00000488989 NOSIPQ9Y314 301 aaKnown RBP14.2□□□□□ -0.14
CLDN11-208ENST00000488989 EPG5Q9HCE0 2579 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 CCDC182A6NF36 153 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 TRIM64A6NGJ6 449 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 SNTNA6NMZ2 147 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 H7C1C5 153 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 NR2C1P13056 603 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 SPI1P17947 270 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 AGTR1P30556 359 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 HTR1FP30939 366 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 TIMP3P35625 211 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 SLC15A1P46059 708 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 CDH11P55287 796 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 LCN6P62502 163 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 EIF2S3LQ2VIR3 472 aaKnown RBP14.19□□□□□ -0.14
CLDN11-208ENST00000488989 THEM4Q5T1C6 240 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 MEPCEQ7L2J0 689 aaKnown RBP14.19□□□□□ -0.14
CLDN11-208ENST00000488989 OR6V1Q8N148 313 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 OR2T4Q8NH00 348 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 KISS1RQ969F8 398 aaPredicted RBP14.19□□□□□ -0.14
CLDN11-208ENST00000488989 RFKQ969G6 155 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 ZNF775Q96BV0 537 aaPredicted RBP14.19□□□□□ -0.14
CLDN11-208ENST00000488989 ZFP3Q96NJ6 502 aa14.19□□□□□ -0.14
CLDN11-208ENST00000488989 RBP7Q96R05 134 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms