RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 MFN2O95140 757 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 HPXP02790 462 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 ADORA3P0DMS8 318 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 TCN1P20061 433 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-231ENST00000488905 ACHEP22303 614 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 GPR6P46095 362 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-231ENST00000488905 BIDP55957 195 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 PCBP3P57721 371 aaKnown RBP15.82■□□□□ 0.12
HDAC6-231ENST00000488905 MAD2L1BPQ15013 274 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-231ENST00000488905 REP15Q6BDI9 236 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF613Q6PF04 617 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 GLCCI1Q86VQ1 547 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF584Q8IVC4 421 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 SMYD1Q8NB12 490 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 CLDND2Q8NHS1 167 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 CCDC28BQ9BUN5 200 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 SLCO1B3Q9NPD5 702 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 FZR1Q9UM11 496 aa15.82■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF500O60304 480 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-231ENST00000488905 NCR1O76036 304 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 SAGP10523 405 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-231ENST00000488905 LSP1P33241 339 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 SEC24CP53992 1094 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 RAB39AQ14964 217 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 AGKQ53H12 422 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 PIWIL3Q7Z3Z3 882 aaKnown RBP15.81■□□□□ 0.12
HDAC6-231ENST00000488905 RDH5Q92781 318 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 TMEM54Q969K7 222 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 MCHR1Q99705 422 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 ARHGDIGQ99819 225 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 NARFLQ9H6Q4 476 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 GLTPQ9NZD2 209 aa15.81■□□□□ 0.12
HDAC6-231ENST00000488905 DYSFO75923 2080 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 A0A1W2PPW3 197 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 OPN1SWP03999 348 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 ATP4BP51164 291 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 NPTX1Q15818 432 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 DLEU7Q6UYE1 221 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 LINC00114Q6XXX2 140 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 WDR88Q6ZMY6 472 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 SLC35D2Q76EJ3 337 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 CARM1Q86X55 608 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 MEX3DQ86XN8 651 aaKnown RBP15.8■□□□□ 0.12
HDAC6-231ENST00000488905 PTOV1Q86YD1 416 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 SKA3Q8IX90 412 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 SLC22A24Q8N4F4 322 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 C11orf65Q8NCR3 313 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 OR6T1Q8NGN1 323 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 OR6X1Q8NH79 312 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 LRRC8CQ8TDW0 803 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF385DQ9H6B1 395 aa15.8■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF275Q9NSD4 429 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-231ENST00000488905 CPSF4LA6NMK7 179 aaKnown RBP15.79■□□□□ 0.12
HDAC6-231ENST00000488905 ENTPD5O75356 428 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 OR6A2O95222 327 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 TFP02787 698 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 SERPINA5P05154 406 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 PATE4P0C8F1 98 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 NAT2P11245 290 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 COL8A2P25067 703 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 MRPS11P82912 194 aaKnown RBP15.79■□□□□ 0.12
HDAC6-231ENST00000488905 MELKQ14680 651 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF74Q16587 644 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 DUSP7Q16829 419 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 CYP51A1Q16850 503 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 ENTPD8Q5MY95 495 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 DHDDSQ86SQ9 333 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 GPR32P1Q8NGA4 272 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 FGFBP3Q8TAT2 258 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 YIPF5Q969M3 257 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF566Q969W8 418 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 TMEM186Q96B77 213 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 RACGAP1Q9H0H5 632 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 HIF1ANQ9NWT6 349 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 DUSP13Q9UII6 198 aa15.79■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF346Q9UL40 294 aaKnown RBP15.79■□□□□ 0.12
HDAC6-231ENST00000488905 FAM157AC9JC47 383 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 RNF13O43567 381 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 CH25HO95992 272 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 THY1P04216 161 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 MSMBP08118 114 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 OR8G3PP0DMU2 310 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 RBBP4Q09028 425 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 ZP4Q12836 540 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 NKPD1Q17RQ9 610 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 RUNDC3AQ59EK9 446 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 RGS7BPQ6MZT1 257 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-231ENST00000488905 DEF8Q6ZN54 512 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-231ENST00000488905 SLC30A7Q8NEW0 376 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 SLC25A44Q96H78 314 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF416Q9BWM5 594 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 METTL17Q9H7H0 456 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-231ENST00000488905 LPAR2Q9HBW0 351 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 NANSQ9NR45 359 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 TMEM38BQ9NVV0 291 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 TAS2R5Q9NYW4 299 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 METRNQ9UJH8 293 aa15.78■□□□□ 0.12
HDAC6-231ENST00000488905 LEF1Q9UJU2 399 aaPredicted RBP15.78■□□□□ 0.12
HDAC6-231ENST00000488905 TANC2Q9HCD6 1990 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms