RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TNFSF9P41273 254 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 CAV2P51636 162 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 GPC3P51654 580 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 CKAP4Q07065 602 aaKnown RBP2.87□□□□□ -1.95
ITGB1-214ENST00000488427 FUT7Q11130 342 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 LDLRAP1Q5SW96 308 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 ARSKQ6UWY0 536 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 C17orf82Q86X59 251 aaPredicted RBP2.87□□□□□ -1.95
ITGB1-214ENST00000488427 CBWD2Q8IUF1 395 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 TMEM252Q8N6L7 170 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 Q8N9L7 120 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 TMEM101Q96IK0 257 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 GSDMCQ9BYG8 508 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 GCOM2Q9BZD3 368 aaPredicted RBP2.87□□□□□ -1.95
ITGB1-214ENST00000488427 OR51J1Q9H342 316 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 ACTR8Q9H981 624 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 YAE1D1Q9NRH1 226 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 ATXN10Q9UBB4 475 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 SCML2Q9UQR0 700 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 ARID1AO14497 2285 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 ANK2Q01484 3957 aa2.87□□□□□ -1.95
ITGB1-214ENST00000488427 NCOA6Q14686 2063 aaPredicted RBP2.86□□□□□ -1.95
ITGB1-214ENST00000488427 A0A1B0GUA9 196 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 TUBAL3A6NHL2 446 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF861PO60384 105 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 SNAPINO95295 136 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 GP1BAP07359 652 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 RNH1P13489 461 aaKnown RBP2.86□□□□□ -1.95
ITGB1-214ENST00000488427 GABRR2P28476 465 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 ARPP19P56211 112 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 DEFA6Q01524 100 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 EGFEM1PQ0D2K5 195 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 PLD1Q13393 1074 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 HERPUD1Q15011 391 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 CEBPEQ15744 281 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF630Q2M218 657 aaPredicted RBP2.86□□□□□ -1.95
ITGB1-214ENST00000488427 ADPRMQ3LIE5 342 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 TPGS2Q68CL5 300 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 SLC8B1Q6J4K2 584 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 LANCL3Q6ZV70 420 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 CATSPER4Q7RTX7 472 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 CMTM8Q8IZV2 173 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 DCAF4L2Q8NA75 395 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 CNNM3Q8NE01 707 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 OR2T33Q8NG76 320 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 OR1E3Q8WZA6 343 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 MYLPFQ96A32 169 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 TMEM121Q9BTD3 319 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 SRXN1Q9BYN0 137 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 SLC25A39Q9BZJ4 359 aaPredicted RBP2.86□□□□□ -1.95
ITGB1-214ENST00000488427 C1orf21Q9H246 121 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 RAB26Q9ULW5 256 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 CCL26Q9Y258 94 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 OARD1Q9Y530 152 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 MAD1L1Q9Y6D9 718 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 GTF3C1Q12789 2109 aa2.86□□□□□ -1.95
ITGB1-214ENST00000488427 LOC100131303A0A0U1RQF7 123 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 GSAPA4D1B5 854 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 KRT87PA6NCN2 255 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 FAM74A7A6NL05 159 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 E7ESA3 106 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 NVLO15381 856 aaKnown RBP2.85□□□□□ -1.95
ITGB1-214ENST00000488427 DUX1O43812 170 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 AKR7A3O95154 331 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 PRDX3P30048 256 aaKnown RBP2.85□□□□□ -1.95
ITGB1-214ENST00000488427 STARP49675 285 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 KDSRQ06136 332 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 CDC20Q12834 499 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 EIF3IQ13347 325 aaKnown RBP2.85□□□□□ -1.95
ITGB1-214ENST00000488427 DEFB109BQ30KR1 87 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 NADK2Q4G0N4 442 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 FAM74A3Q4VXF1 159 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 NIPAL3Q6P499 406 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 SYVN1Q86TM6 617 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 TCTEX1D2Q8WW35 142 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 DCUN1D4Q92564 292 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 UCN3Q969E3 161 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 NOL4LQ96MY1 436 aaPredicted RBP2.85□□□□□ -1.95
ITGB1-214ENST00000488427 NRTNQ99748 197 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 NUP58Q9BVL2 599 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 AGPAT5Q9NUQ2 364 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 SOHLH2Q9NX45 425 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 PISDQ9UG56 409 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 RIMS3Q9UJD0 308 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 TCHHQ07283 1943 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 USF3Q68DE3 2245 aa2.85□□□□□ -1.95
ITGB1-214ENST00000488427 PPIAL4CA0A0B4J2A2 164 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF264O43296 627 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 NMT2O60551 498 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 HCN1O60741 890 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 IGHV3-48P01763 117 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 POLR2MP0CAP2 368 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 PPIAL4GP0DN37 164 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 TOP1P11387 765 aaKnown RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF17P17021 662 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 XRCC1P18887 633 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 PAICSP22234 425 aaKnown RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 MAPK3P27361 379 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 CD82P27701 267 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 CD1BP29016 333 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms