RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 FAM69AQ5T7M9 428 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 ATAD3BQ5T9A4 648 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 ANKRD26P1Q6NSI1 321 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 NOXRED1Q6NXP6 359 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 ARL9Q6T311 187 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 NHLRC1Q6VVB1 395 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 C3P1Q6ZMU1 363 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 SPATA19Q7Z5L4 167 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 LRRC8AQ8IWT6 810 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 SPARTQ8N0X7 666 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 C1orf52Q8N6N3 182 aaKnown RBP2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 TRIML2Q8N7C3 387 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 COX18Q8N8Q8 333 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 PAPD5Q8NDF8 572 aaKnown RBP2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 OR9K2Q8NGE7 335 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 OR5R1Q8NH85 324 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 BBS10Q8TAM1 723 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 NRGNQ92686 78 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 DACT3Q96B18 629 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 NEIL1Q96FI4 390 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 AJUBAQ96IF1 538 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 HIST1H2AAQ96QV6 131 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 ADOQ96SZ5 270 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 EGLN1Q9GZT9 426 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 DPH5Q9H2P9 285 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 CCDC134Q9H6E4 229 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 ALG9Q9H6U8 611 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF665Q9H7R5 613 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 DCLRE1BQ9H816 532 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 MTHFD2LQ9H903 347 aaPredicted RBP2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 MIEF1Q9NQG6 463 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 MMP26Q9NRE1 261 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 CD300AQ9UGN4 299 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 IL19Q9UHD0 177 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 OAZ3Q9UMX2 235 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC12A4Q9UP95 1085 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 CHMP2BQ9UQN3 213 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 RNF11Q9Y3C5 154 aa2.33□□□□□ -2.04
DEPDC1-203ENST00000488146 CFAP47Q6ZTR5 3102 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 A0A0G2JPF8 293 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM129A0AVI4 362 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SH3PXD2BA1X283 911 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 PRORSD1PA6NEY8 169 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 HNRNPCL2B2RXH8 293 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 B5MCH6 92 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 HNRNPCL3B7ZW38 293 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 FTCDNL1E5RQL4 147 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 F5H697 171 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 hCG_2039718K7EN88 272 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TNFSF11O14788 317 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SURF4O15260 269 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 BIRC5O15392 142 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 HNRNPCL1O60812 293 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 BCAS1O75363 584 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ERAL1O75616 437 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TSPAN9O75954 239 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 RBP4P02753 201 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ANXA4P09525 319 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 HNRNPCL4P0DMR1 293 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 HPGDP15428 266 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF14P17017 642 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 PRKAR1BP31321 381 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 RBM34P42696 430 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 RAD52P43351 418 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 GPR6P46095 362 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 DYNLT3P51808 116 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 CLDN20P56880 219 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 UBE2NP61088 152 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 FADDQ13158 208 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 GK3PQ14409 553 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 MED22Q15528 200 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 C2orf68Q2NKX9 166 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TBRG1Q3YBR2 411 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TRMT12Q53H54 448 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 H1FNTQ75WM6 255 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 C16orf82Q7Z2V1 217 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 PEG10Q86TG7 708 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM123Q8N131 208 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 Q8N2B8 174 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ZDHHC22Q8N966 263 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 OR9A2Q8NGT5 310 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 OR6X1Q8NH79 312 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 DUSP19Q8WTR2 217 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 PPWD1Q96BP3 646 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 CFAP36Q96G28 342 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SORCS2Q96PQ0 1159 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 MACROD1Q9BQ69 325 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 UNKLQ9H9P5 680 aaKnown RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 CA10Q9NS85 328 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 ZDHHC18Q9NUE0 388 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 LGALS13Q9UHV8 139 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 FAF1Q9UNN5 650 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 LAMP3Q9UQV4 416 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 CAB39Q9Y376 341 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 SAR1BQ9Y6B6 198 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 IGHV2OR16-5A0A0B4J2B6 119 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 IGHV4-61A0A0C4DH41 118 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 CTAGE15A4D2H0 777 aa2.32□□□□□ -2.04
DEPDC1-203ENST00000488146 UNC119BA6NIH7 251 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms