RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ARG2P78540 354 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 LPAL2Q16609 132 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 MAP3K3Q99759 626 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 TCEAL2Q9H3H9 227 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-206ENST00000487222 E9PI62 339 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 GABARAPH6UMI1 98 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 HBE1P02100 147 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 CPEP16870 476 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 WDR88Q6ZMY6 472 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 MDGA2Q7Z553 956 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 WDR5BQ86VZ2 330 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 RBPMSQ93062 196 aaKnown RBP13.54□□□□□ -0.24
EPHB4-206ENST00000487222 CCNL2Q96S94 520 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-206ENST00000487222 SEC22CQ9BRL7 303 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 RNF167Q9H6Y7 350 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 ATP13A2Q9NQ11 1180 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 SMLR1H3BR10 107 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 M0QYG6 137 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 SELENOFO60613 162 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 ICAM2P13598 275 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 ARRB2P32121 409 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 UBE2KP61086 200 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 LINC00346Q8IVM7 164 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 PDCD1LG2Q9BQ51 273 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 TNFRSF12AQ9NP84 129 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 OR52A1Q9UKL2 312 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 C19orf53Q9UNZ5 99 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-206ENST00000487222 BET1O15155 118 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 RAB5CP51148 216 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 CATR1Q13166 79 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 EBPQ15125 230 aaKnown RBP13.54□□□□□ -0.24
EPHB4-206ENST00000487222 STK11Q15831 433 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 GDPD3Q7L5L3 318 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 OR5D18Q8NGL1 313 aa13.54□□□□□ -0.24
EPHB4-206ENST00000487222 PRMT8Q9NR22 394 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-206ENST00000487222 TMEM184BQ9Y519 407 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-206ENST00000487222 CCDC163A0A0D9SF12 145 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 PLSCR5A0PG75 271 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 IGLV3-27P01718 113 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 SOWAHCQ53LP3 525 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ACSM5Q6NUN0 579 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF620Q6ZNG0 422 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 DVL3Q92997 716 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 FGGYQ96C11 551 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ISYNA1Q9NPH2 558 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 DAPP1Q9UN19 280 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 A0A1B0GTW7 788 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 B3GALT4O96024 378 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 SBK3P0C264 359 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 RPS2P15880 293 aaKnown RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 CNR1P21554 472 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 TNFSF4P23510 183 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 GABREP78334 506 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 AGBL5Q8NDL9 886 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 MSI2Q96DH6 328 aaKnown RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 TSSK2Q96PF2 358 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 GSX2Q9BZM3 304 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 TLCD2A6NGC4 264 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 TARM1B6A8C7 271 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 CBX7O95931 251 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 CHRM2P08172 466 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF728P0DKX0 622 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 CALCBP10092 127 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 EIF1P41567 113 aaKnown RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 EPHA5P54756 1037 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 HSD17B7P56937 341 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 PDLIM3Q53GG5 364 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 LANCL3Q6ZV70 420 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 PLPP5Q8NEB5 264 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 LIN37Q96GY3 246 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 SDF2Q99470 211 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 OCSTAMPQ9BR26 566 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 IKZF5Q9H5V7 419 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 OBP2BQ9NPH6 170 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 HINT3Q9NQE9 182 aaKnown RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 SERTAD4Q9NUC0 356 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 LRP5O75197 1615 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 TMEM200CA6NKL6 621 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 TSTD3H0UI37 97 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 BCAT2O15382 392 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 HOXC11O43248 304 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 EIF1BO60739 113 aaKnown RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ZDHHC11BP0C7U3 371 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 PLGLAQ15195 96 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ARHGAP11BQ3KRB8 267 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 AADACL3Q5VUY0 350 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 FAM122CQ6P4D5 195 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 PAPD4Q6PIY7 484 aaKnown RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 PLPP7Q8NBV4 271 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 SCARB1Q8WTV0 552 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 CPNE4Q96A23 557 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ELF4Q99607 663 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 CMC2Q9NRP2 79 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 FGF21Q9NSA1 209 aa13.53□□□□□ -0.24
EPHB4-206ENST00000487222 ZNF223Q9UK11 482 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-206ENST00000487222 TMEM221A6NGB7 291 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms