RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 NPIPB13A6NJU9 1138 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF726A6NNF4 738 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 NPIPB4C9JG80 1138 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 H0YJX3 145 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 CCL21O00585 134 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 GPR171O14626 319 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 SLC16A6O15403 523 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 ARHGEF9O43307 516 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 IDH3BO43837 385 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 TRMUO75648 421 aaKnown RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 TNFSF13O75888 250 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 IL2RAP01589 272 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 TMIGD3P0DMS9 266 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 APEHP13798 732 aaKnown RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 ACADSP16219 412 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 HIST1H1CP16403 213 aaKnown RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 SDHAP31040 664 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 GRK5P34947 590 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 CDKN2AP42771 156 aaKnown RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 SMSP52788 366 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 PER3P56645 1201 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 LGALS3BPQ08380 585 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 DBPQ10586 325 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 MESTQ5EB52 335 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 TMEM201Q5SNT2 666 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 PHYHD1Q5SRE7 291 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 RIPPLY2Q5TAB7 128 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 CARD17Q5XLA6 110 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 C12orf73Q69YU5 71 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 GPR139Q6DWJ6 353 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 TMEM211Q6ICI0 200 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 NIPAL3Q6P499 406 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 VWA1Q6PCB0 445 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 IZUMO2Q6UXV1 221 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 PTCHD4Q6ZW05 846 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 FAM214BQ7L5A3 538 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 BTLAQ7Z6A9 289 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 DHRSXQ8N5I4 330 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 CNEP1R1Q8N9A8 125 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 OR4K13Q8NH42 304 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 OR6X1Q8NH79 312 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 CYGBQ8WWM9 190 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 ITLN2Q8WWU7 325 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 HDAC2Q92769 488 aaKnown RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 UBE2FQ969M7 185 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 TMEM45BQ96B21 275 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 STARD4Q96DR4 205 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 OR2M2Q96R28 347 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 DDOQ99489 341 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 TACO1Q9BSH4 297 aaKnown RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 C12orf49Q9H741 205 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 TVP23BQ9NYZ1 205 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 EMC3Q9P0I2 261 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 ENOPH1Q9UHY7 261 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 NDRG4Q9ULP0 352 aaKnown RBP11.31□□□□□ -0.6
HDAC6-229ENST00000486665 BAIAP2Q9UQB8 552 aa11.31□□□□□ -0.6
HDAC6-229ENST00000486665 C2CD3Q4AC94 2353 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 H7C1C5 153 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 M0R129 80 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 SURF4O15260 269 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 MRPL33O75394 65 aaKnown RBP11.3□□□□□ -0.6
HDAC6-229ENST00000486665 CLIC3O95833 236 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 HMGN1P05114 100 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 CTSSP25774 331 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 GGT2P36268 569 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 LCN6P62502 163 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 EFNB1P98172 346 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.3□□□□□ -0.6
HDAC6-229ENST00000486665 KRR1Q13601 381 aaKnown RBP11.3□□□□□ -0.6
HDAC6-229ENST00000486665 C6orf52Q5T4I8 152 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 CASP12Q6UXS9 341 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 LIX1LQ8IVB5 337 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 TMEM123Q8N131 208 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 SYT14Q8NB59 555 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 SLC37A3Q8NCC5 494 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 NPEPL1Q8NDH3 523 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 OR52E2Q8NGJ4 325 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 TFAP2CQ92754 450 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 SLC25A44Q96H78 314 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-229ENST00000486665 HRASLS5Q96KN8 279 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 PITX2Q99697 317 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 ADI1Q9BV57 179 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 MRPL13Q9BYD1 178 aaKnown RBP11.3□□□□□ -0.6
HDAC6-229ENST00000486665 ZFHX3Q15911 3703 aa11.3□□□□□ -0.6
HDAC6-229ENST00000486665 CCDC168Q8NDH2 2452 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 A0A1B0GUH1 482 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 OR6C68A6NDL8 312 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 A6NIZ1 184 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 PRKYO43930 277 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 UPK3AO75631 287 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 CGAP01215 116 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 CRHP06850 196 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 PGA4P0DJD7 388 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 PGA3P0DJD8 388 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 NOS3P29474 1203 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 CAPGP40121 348 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 RAP1BP61224 184 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms