RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 COX6A1P12074 109 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 ALOX5APP20292 161 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 APEX1P27695 318 aaKnown RBP18.33■□□□□ 0.53
HPS3-206ENST00000486530 TSPAN7P41732 249 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 CD97P48960 835 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 PLPPR5Q32ZL2 321 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 OR2Y1Q8NGV0 311 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 RNF166Q96A37 237 aaPredicted RBP18.33■□□□□ 0.53
HPS3-206ENST00000486530 ARL5BQ96KC2 179 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 POTEKPQ9BYX7 375 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 AKAP7Q9P0M2 348 aaPredicted RBP18.33■□□□□ 0.53
HPS3-206ENST00000486530 HRH3Q9Y5N1 445 aa18.33■□□□□ 0.53
HPS3-206ENST00000486530 KMT2EQ8IZD2 1858 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 A6NIZ1 184 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 NPIPB13A6NJU9 1138 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 NOTOA8MTQ0 251 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 PRR33A8MZF0 331 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 NPIPB4C9JG80 1138 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 TP53I11O14683 189 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 UPK3AO75631 287 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 ELK1P19419 428 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 CASP3P42574 277 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 NANOS3P60323 173 aaKnown RBP18.33■□□□□ 0.52
HPS3-206ENST00000486530 RAP1BP61224 184 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 RAP1AP62834 184 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 INSM1Q01101 510 aaPredicted RBP18.33■□□□□ 0.52
HPS3-206ENST00000486530 SF3A2Q15428 464 aaKnown RBP18.33■□□□□ 0.52
HPS3-206ENST00000486530 OR7A5Q15622 319 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 HSD17B12Q53GQ0 312 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 H1FNTQ75WM6 255 aaPredicted RBP18.33■□□□□ 0.52
HPS3-206ENST00000486530 DPY19L4Q7Z388 723 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 NRARPQ7Z6K4 114 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 IMMP1LQ96LU5 166 aa18.33■□□□□ 0.52
HPS3-206ENST00000486530 SLC22A23A1A5C7 686 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 SSX4O60224 188 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 HLA-DQB1P01920 261 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 SLC2A2P11168 524 aaPredicted RBP18.32■□□□□ 0.52
HPS3-206ENST00000486530 IL11P20809 199 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 ALKBH1Q13686 389 aaKnown RBP18.32■□□□□ 0.52
HPS3-206ENST00000486530 TAB1Q15750 504 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 KIF26BQ2KJY2 2108 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 LIPNQ5VXI9 398 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 Q8N402 240 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 OTOSQ8NHW6 89 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 M1APQ8TC57 530 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 ITPKCQ96DU7 683 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 CMKLR1Q99788 373 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 SLC22A4Q9H015 551 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 CHST11Q9NPF2 352 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 CYSLTR2Q9NS75 346 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 EXTL2Q9UBQ6 330 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 MALT1Q9UDY8 824 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 IKZF2Q9UKS7 526 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 HS3ST3B1Q9Y662 390 aa18.32■□□□□ 0.52
HPS3-206ENST00000486530 IGLV1-36A0A0B4J1U3 117 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 MS4A18H0YCH9 400 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 SNPHO15079 494 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 SLC16A7O60669 478 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 ITGA10O75578 1167 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 RPP14O95059 124 aaKnown RBP18.31■□□□□ 0.52
HPS3-206ENST00000486530 ZFPL1O95159 310 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 HLA-DQA2P01906 255 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 TALDO1P37837 337 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 DAP3P51398 398 aaKnown RBP18.31■□□□□ 0.52
HPS3-206ENST00000486530 SNTA1Q13424 505 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 MELKQ14680 651 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 P2RY14Q15391 338 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 MS4A18Q3C1V0 323 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 SLC25A35Q3KQZ1 300 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 TRIQKQ629K1 86 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 ZCCHC4Q9H5U6 513 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 ALKBH4Q9NXW9 302 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 A0A1W2PPK0 400 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 ANKRD61A6NGH8 418 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 FAM47E-STBD1D6RA91 191 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 ZNF806P0C7X5 589 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 TFPIP10646 304 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 RBMS1P29558 406 aaKnown RBP18.31■□□□□ 0.52
HPS3-206ENST00000486530 CRABP1P29762 137 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 RFX2P48378 723 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 FAM205BPQ63HN1 556 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 SAMD12Q8N8I0 201 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 OR2M3Q8NG83 312 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 TRMT10AQ8TBZ6 339 aaKnown RBP18.31■□□□□ 0.52
HPS3-206ENST00000486530 THEM6Q8WUY1 208 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 ASB17Q8WXJ9 295 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 RELTQ969Z4 430 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 TXNDC15Q96J42 360 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.31■□□□□ 0.52
HPS3-206ENST00000486530 SERINC1Q9NRX5 453 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 ABRACLQ9P1F3 81 aa18.31■□□□□ 0.52
HPS3-206ENST00000486530 TEX51A0A1B0GUA7 166 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 LIPT2A6NK58 231 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 NPIPA5E9PKD4 350 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 FZD7O75084 574 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 GPANK1O95872 356 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 IMPDH2P12268 514 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 CTLA4P16410 223 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 NPR2P20594 1047 aa18.3■□□□□ 0.52
HPS3-206ENST00000486530 FOLR3P41439 243 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms