RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 TRIM69Q86WT6 500 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 OSR2Q8N2R0 312 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 TRMT10AQ8TBZ6 339 aaKnown RBP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 PYROXD1Q8WU10 500 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 GEMIN6Q8WXD5 167 aaKnown RBP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 CXorf40BQ96DE9 158 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 TPPP3Q9BW30 176 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 FBN1P35555 2871 aaKnown RBP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 GAPDHP04406 335 aaKnown RBP2.25□□□□□ -2.05
CCDC66-219ENST00000484441 FGF1P05230 155 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 IGKV4-1P06312 121 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 IQCF3P0C7M6 154 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 PRPS2P11908 318 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 ATP6V1C1P21283 382 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 CCR1P32246 355 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 CD86P42081 329 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 RAP1AP62834 184 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 KLHL38Q2WGJ6 581 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 HES5Q5TA89 166 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 CNIH2Q6PI25 160 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 RIMKLAQ8IXN7 391 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 MREGQ8N565 214 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 MFSD9Q8NBP5 474 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 MAGEE2Q8TD90 523 aaPredicted RBP2.25□□□□□ -2.05
CCDC66-219ENST00000484441 EMG1Q92979 244 aaKnown RBP2.25□□□□□ -2.05
CCDC66-219ENST00000484441 SGK3Q96BR1 496 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 CCT7Q99832 543 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 OSBPL10Q9BXB5 764 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 PARD6BQ9BYG5 372 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 C12orf10Q9HB07 376 aa2.25□□□□□ -2.05
CCDC66-219ENST00000484441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.25□□□□□ -2.05
CCDC66-219ENST00000484441 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.25□□□□□ -2.05
CCDC66-219ENST00000484441 IGHV3-74A0A0B4J1X5 117 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 KIR2DS1A0A191URI9 304 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 TMEM223A0PJW6 202 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 METTL21EPA6NDL7 271 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 A8MUU9 505 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 ARPC3O15145 178 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 IFNB1P01574 187 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 KRT13P13646 458 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 CYB561P49447 251 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 ERCC8Q13216 396 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 KIR2DS1Q14954 304 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 PON3Q15166 354 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 CALHM3Q86XJ0 350 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 NUDCD3Q8IVD9 361 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 ZNF557Q8N988 423 aaPredicted RBP2.24□□□□□ -2.05
CCDC66-219ENST00000484441 OR2T34Q8NGX1 318 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 MTMR9Q96QG7 549 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 ADAP2Q9NPF8 381 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 S4R3C0 116 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 YEATS2Q9ULM3 1422 aa2.24□□□□□ -2.05
CCDC66-219ENST00000484441 DHX57Q6P158 1386 aaKnown RBP2.23□□□□□ -2.05
CCDC66-219ENST00000484441 SHROOM3Q8TF72 1996 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 TCN2P20062 427 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 FDFT1P37268 417 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 ACAA2P42765 397 aaKnown RBP2.23□□□□□ -2.05
CCDC66-219ENST00000484441 NAMPTP43490 491 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 POU2AF1Q16633 256 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 NADK2Q4G0N4 442 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 TRIM40Q6P9F5 258 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 ZNF493Q6ZR52 646 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 PEX26Q7Z412 305 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 ECHDC2Q86YB7 292 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 LINC00304Q8N9R0 145 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 SLC38A2Q96QD8 506 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 FOXC2Q99958 501 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 MRPL37Q9BZE1 423 aaKnown RBP2.23□□□□□ -2.05
CCDC66-219ENST00000484441 HMG20AQ9NP66 347 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 ISYNA1Q9NPH2 558 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 SLC35D1Q9NTN3 355 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 BFARQ9NZS9 450 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 PSG8Q9UQ74 426 aa2.23□□□□□ -2.05
CCDC66-219ENST00000484441 KIF16BQ96L93 1317 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 CENPJQ9HC77 1338 aaPredicted RBP2.22□□□□□ -2.05
CCDC66-219ENST00000484441 SCN1AP35498 2009 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 ATP10AO60312 1499 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 ZNF726A6NNF4 738 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 MGRN1O60291 552 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 RP2O75695 350 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 IGHV2-5P01817 119 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 RPA2P15927 270 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 YAP1P46937 504 aaKnown RBP2.22□□□□□ -2.05
CCDC66-219ENST00000484441 IRX3P78415 501 aaPredicted RBP2.22□□□□□ -2.05
CCDC66-219ENST00000484441 CDK16Q00536 496 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 SCRN3Q0VDG4 424 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 ZNF816Q0VGE8 651 aaPredicted RBP2.22□□□□□ -2.05
CCDC66-219ENST00000484441 KCTD21Q4G0X4 260 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 OR4F3Q6IEY1 312 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 GATSQ8NAP1 163 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 NOXO1Q8NFA2 376 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 SDR42E1Q8WUS8 393 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 RLN3Q8WXF3 142 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 DTNBP1Q96EV8 351 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 COQ2Q96H96 371 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 RAB33BQ9H082 229 aa2.22□□□□□ -2.05
CCDC66-219ENST00000484441 GPATCH8Q9UKJ3 1502 aaKnown RBP2.22□□□□□ -2.05
CCDC66-219ENST00000484441 IGLV1-50A0A075B6I6 118 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms