RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 FAM133AQ8N9E0 248 aa1.47□□□□□ -2.17
SCAF11-207ENST00000484275 CTNNBL1Q8WYA6 563 aaPredicted RBP1.47□□□□□ -2.17
SCAF11-207ENST00000484275 OMDQ99983 421 aa1.47□□□□□ -2.17
SCAF11-207ENST00000484275 YY1AP1Q9H869 796 aa1.47□□□□□ -2.17
SCAF11-207ENST00000484275 ZNF230Q9UIE0 474 aaPredicted RBP1.47□□□□□ -2.17
SCAF11-207ENST00000484275 ZNF391Q9UJN7 358 aa1.47□□□□□ -2.17
SCAF11-207ENST00000484275 KCNIP3Q9Y2W7 256 aa1.47□□□□□ -2.17
SCAF11-207ENST00000484275 U3KQV3 271 aa1.47□□□□□ -2.17
SCAF11-207ENST00000484275 MSH6P52701 1360 aa1.47□□□□□ -2.17
SCAF11-207ENST00000484275 FANCIQ9NVI1 1328 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 XPO1O14980 1071 aaKnown RBP1.46□□□□□ -2.18
SCAF11-207ENST00000484275 MAPK13O15264 365 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 LGALS3P17931 250 aaKnown RBP1.46□□□□□ -2.18
SCAF11-207ENST00000484275 IL12AP29459 219 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 SLC11A1P49279 550 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 CCR8P51685 355 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 IL1RL1Q01638 556 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 KLRB1Q12918 225 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 H2AFVQ71UI9 128 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 ECHDC2Q86YB7 292 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 MREGQ8N565 214 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 MIR7-3HGQ8N6C7 128 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 SDR42E1Q8WUS8 393 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 UBE2E3Q969T4 207 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 TGM7Q96PF1 710 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 GPA33Q99795 319 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 TIMM29Q9BSF4 260 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 LINC00597Q9H2U6 94 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 GPATCH2LQ9NWQ4 482 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 TMCO1Q9UM00 188 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 SIGLEC9Q9Y336 463 aa1.46□□□□□ -2.18
SCAF11-207ENST00000484275 IGHV3-74A0A0B4J1X5 117 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 LGALS9O00182 355 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 CLDN3O15551 220 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 BCHEP06276 602 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 NCF1P14598 390 aaPredicted RBP1.45□□□□□ -2.18
SCAF11-207ENST00000484275 DRD5P21918 477 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 GNA11P29992 359 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 GPR6P46095 362 aaPredicted RBP1.45□□□□□ -2.18
SCAF11-207ENST00000484275 SUB1P53999 127 aaKnown RBP eCLIP1.45□□□□□ -2.18
SCAF11-207ENST00000484275 IRF4Q15306 451 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 SAXO2Q658L1 398 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 MAIP1Q8WWC4 291 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 CCDC47Q96A33 483 aaKnown RBP1.45□□□□□ -2.18
SCAF11-207ENST00000484275 MED8Q96G25 268 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 LRRN3Q9H3W5 708 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 NHEJ1Q9H9Q4 299 aaPredicted RBP1.45□□□□□ -2.18
SCAF11-207ENST00000484275 HMG20AQ9NP66 347 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 ADAP2Q9NPF8 381 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 KIAA1257Q9ULG3 409 aa1.45□□□□□ -2.18
SCAF11-207ENST00000484275 PTPRTO14522 1441 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 OR5B21A6NL26 309 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 RAMP3O60896 148 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 UPK3AO75631 287 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 RP2O75695 350 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 CCNE2O96020 404 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 MAPK3P27361 379 aaPredicted RBP1.44□□□□□ -2.18
SCAF11-207ENST00000484275 NAMPTP43490 491 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 RFX3P48380 749 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 CSNK1A1P48729 337 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 CX3CR1P49238 355 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 RGS4P49798 205 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 CRYBB1P53674 252 aaPredicted RBP1.44□□□□□ -2.18
SCAF11-207ENST00000484275 ERVK-25P63136 954 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 ZNF616Q08AN1 781 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 SCRN3Q0VDG4 424 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 FAM78AQ5JUQ0 283 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 PRMT9Q6P2P2 845 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 PLA2G4DQ86XP0 818 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 GATSQ8NAP1 163 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 SYT14Q8NB59 555 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 FAM110BQ8TC76 370 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 TM4SF18Q96CE8 201 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 NARS2Q96I59 477 aaKnown RBP1.44□□□□□ -2.18
SCAF11-207ENST00000484275 MS4A4EQ96PG1 132 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 CLCC1Q96S66 551 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 DOK1Q99704 481 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 TEKT3Q9BXF9 490 aa1.44□□□□□ -2.18
SCAF11-207ENST00000484275 ZNF726A6NNF4 738 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 A8MUI8 341 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 HIDE1A8MVS5 230 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 CCER2I3L3R5 266 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 PRKAB2O43741 272 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 MFN2O95140 757 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 SLC25A14O95258 325 aaPredicted RBP1.43□□□□□ -2.18
SCAF11-207ENST00000484275 IL4P05112 153 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 FABP3P05413 133 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 GNAO1P09471 354 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 OR56A5P0C7T3 313 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 ZNF806P0C7X5 589 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 CCDC130P13994 396 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 CDH4P55283 916 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 GINS1Q14691 196 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 UTS2BQ765I0 119 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 BHLHA15Q7RTS1 189 aaPredicted RBP1.43□□□□□ -2.18
SCAF11-207ENST00000484275 ZNF382Q96SR6 550 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 FAIM2Q9BWQ8 316 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 RWDD1Q9H446 243 aaPredicted RBP1.43□□□□□ -2.18
SCAF11-207ENST00000484275 COQ10BQ9H8M1 238 aa1.43□□□□□ -2.18
SCAF11-207ENST00000484275 EXD2Q9NVH0 621 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms