RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ZNF749O43361 778 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 IGHEP01854 428 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 TRGC2P03986 189 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OPN1LWP04000 364 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR4A8P0C604 315 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 COX7A2P14406 83 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 PGAM2P15259 253 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 BRS3P32247 399 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 WNT5AP41221 380 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 TM4SF4P48230 202 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 FLT3LGP49771 235 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 AFF3P51826 1226 aaKnown RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 DDX39BQ13838 428 aaKnown RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 CPSF6Q16630 551 aaKnown RBP eCLIP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 FBXO47Q5MNV8 452 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SBSNQ6UWP8 590 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 GKN2Q86XP6 184 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 FAM185AQ8N0U4 392 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 GCNT2Q8N0V5 402 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 EID2Q8N6I1 236 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 C10orf53Q8N6V4 93 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 INO80EQ8NBZ0 244 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 REPS2Q8NFH8 660 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 MRGPRDQ8TDS7 321 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 WFDC12Q8WWY7 111 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SAT2Q96F10 170 aaPredicted RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 OR5B2Q96R09 309 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SMOQ99835 787 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 RIOK2Q9BVS4 552 aaKnown RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 ELOVL1Q9BW60 279 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 SYT4Q9H2B2 425 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 APMAPQ9HDC9 416 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 TLR8Q9NR97 1041 aaKnown RBP7.16□□□□□ -1.26
COL4A5-205ENST00000483338 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
COL4A5-205ENST00000483338 PRRT4C9JH25 899 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 EPHX1P07099 455 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 IL6RP08887 468 aaPredicted RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 CDH11P55287 796 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 NAAAQ02083 359 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 SRSF4Q08170 494 aaKnown RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 NXPE4Q6UWF7 544 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 BTNL8Q6UX41 500 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 SLC24A5Q71RS6 500 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 NDUFAF7Q7L592 441 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 CD163Q86VB7 1156 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 OR2L3Q8NG85 312 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 OR4C16Q8NGL9 310 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 OR13C5Q8NGS8 318 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF671Q8TAW3 534 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 SLC7A13Q8TCU3 470 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 RNASEH2CQ8TDP1 164 aaKnown RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ABHD5Q8WTS1 349 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 MUCL1Q96DR8 90 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 HHIPL1Q96JK4 782 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 DERL3Q96Q80 235 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 G6PC3Q9BUM1 346 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 CXCL16Q9H2A7 254 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 COMMD9Q9P000 198 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 H7C4K7 107 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 K7EP13 123 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 FAAHO00519 579 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 GPR32O75388 356 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF432O94892 652 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 MT-ND5P03915 603 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 PIRTP0C851 137 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 TRGC1P0CF51 173 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 IFNGR2P38484 337 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 RPL29P47914 159 aaKnown RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 CDKN1CP49918 316 aaPredicted RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ABLIM2Q6H8Q1 611 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF343Q6P1L6 599 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 MAML2Q8IZL2 1156 aaPredicted RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ARL14Q8N4G2 192 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 C17orf47Q8NEP4 570 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 OR56B2PQ8NGI1 322 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 APOBEC4Q8WW27 367 aaKnown RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ASB17Q8WXJ9 295 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 SMPDL3BQ92485 455 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 OTUB2Q96DC9 234 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 SMARCD1Q96GM5 515 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 JSRP1Q96MG2 331 aaPredicted RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF2Q9BSG1 426 aaPredicted RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 RSPO3Q9BXY4 272 aaPredicted RBP7.15□□□□□ -1.26
COL4A5-205ENST00000483338 SLC39A8Q9C0K1 460 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 FOXJ3Q9UPW0 622 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 RNF24Q9Y225 148 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 ADAM18Q9Y3Q7 739 aa7.15□□□□□ -1.26
COL4A5-205ENST00000483338 NKX6-3A6NJ46 265 aa7.15□□□□□ -1.27
COL4A5-205ENST00000483338 DRGXA6NNA5 263 aa7.15□□□□□ -1.27
COL4A5-205ENST00000483338 FFAR2O15552 330 aa7.15□□□□□ -1.27
COL4A5-205ENST00000483338 CNMDO75829 334 aa7.15□□□□□ -1.27
COL4A5-205ENST00000483338 ERCC1P07992 297 aaPredicted RBP7.15□□□□□ -1.27
COL4A5-205ENST00000483338 MMP2P08253 660 aa7.15□□□□□ -1.27
COL4A5-205ENST00000483338 MMP7P09237 267 aaPredicted RBP7.15□□□□□ -1.27
COL4A5-205ENST00000483338 OR8U9P0C7N5 309 aa7.15□□□□□ -1.27
COL4A5-205ENST00000483338 PGA3P0DJD8 388 aa7.15□□□□□ -1.27
COL4A5-205ENST00000483338 MMP11P24347 488 aa7.15□□□□□ -1.27
COL4A5-205ENST00000483338 NOVA1P51513 510 aaKnown RBP7.15□□□□□ -1.27
COL4A5-205ENST00000483338 RPS15P62841 145 aaKnown RBP7.15□□□□□ -1.27
COL4A5-205ENST00000483338 EIF5AP63241 154 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms