RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 MVKQ03426 396 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 FADDQ13158 208 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 OR1Q1Q15612 314 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 TTMPQ5BVD1 217 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 PAGE3Q5JUK9 113 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 FAHD2BQ6P2I3 314 aaPredicted RBP11.91□□□□□ -0.5
VARS-226ENST00000483275 ULK3Q6PHR2 472 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 DHRS4L2Q6PKH6 230 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 C1orf229Q6ZS94 237 aaPredicted RBP11.91□□□□□ -0.5
VARS-226ENST00000483275 SKA3Q8IX90 412 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 CCDC36Q8IYA8 594 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 IL17RDQ8NFM7 739 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 LRRC8CQ8TDW0 803 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 DNAJA4Q8WW22 397 aaPredicted RBP11.91□□□□□ -0.5
VARS-226ENST00000483275 RDH5Q92781 318 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 SLC47A1Q96FL8 570 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 FAHD2AQ96GK7 314 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 RACGAP1Q9H0H5 632 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 VAPAQ9P0L0 249 aa11.91□□□□□ -0.5
VARS-226ENST00000483275 TESQ9UGI8 421 aaKnown RBP11.91□□□□□ -0.5
VARS-226ENST00000483275 LOC102725191A0A1B0GVB3 256 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 ZNF726A6NNF4 738 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 KPNA4O00629 521 aaPredicted RBP11.9□□□□□ -0.5
VARS-226ENST00000483275 PLPP3O14495 311 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 OPN1SWP03999 348 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 ADORA3P0DMS8 318 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 ADRA2CP18825 462 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 ACHEP22303 614 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 EVX1P49640 407 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 LMO4P61968 165 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 CCL8P80075 99 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 NKPD1Q17RQ9 610 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 REEP3Q6NUK4 255 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 C5orf46Q6UWT4 87 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 FUNDC1Q8IVP5 155 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 SMYD1Q8NB12 490 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 ICA1LQ8NDH6 482 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 SLC35B4Q969S0 331 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 RAD21L1Q9H4I0 556 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 MRPL39Q9NYK5 338 aaKnown RBP11.9□□□□□ -0.5
VARS-226ENST00000483275 SELENONQ9NZV5 590 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 TAAR3PQ9P1P4 343 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 PRDM4Q9UKN5 801 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 GRIP1Q9Y3R0 1128 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 SPEF1Q9Y4P9 236 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 CORINQ9Y5Q5 1042 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 CACNG2Q9Y698 323 aa11.9□□□□□ -0.5
VARS-226ENST00000483275 SPRY1O43609 319 aaPredicted RBP11.89□□□□□ -0.51
VARS-226ENST00000483275 UBL3O95164 117 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 EPHA1P21709 976 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 PCMT1P22061 227 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 RBMXP38159 391 aaKnown RBP11.89□□□□□ -0.51
VARS-226ENST00000483275 RPS23P62266 143 aaKnown RBP11.89□□□□□ -0.51
VARS-226ENST00000483275 SCARB2Q14108 478 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 NPTX1Q15818 432 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 FAM91A1Q658Y4 838 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 ZNF627Q7L945 461 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 NET1Q7Z628 596 aaPredicted RBP11.89□□□□□ -0.51
VARS-226ENST00000483275 TSPYL5Q86VY4 417 aaPredicted RBP11.89□□□□□ -0.51
VARS-226ENST00000483275 KRT73Q86Y46 540 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 LRRC17Q8N6Y2 441 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 SCAIQ8N9R8 606 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 OR51F2Q8NH61 342 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 LRR1Q96L50 414 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 EPYCQ99645 322 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 MS4A5Q9H3V2 200 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 TMEM27Q9HBJ8 222 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 INTS9Q9NV88 658 aaKnown RBP11.89□□□□□ -0.51
VARS-226ENST00000483275 CCDC167Q9P0B6 97 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.89□□□□□ -0.51
VARS-226ENST00000483275 USH1CQ9Y6N9 552 aa11.89□□□□□ -0.51
VARS-226ENST00000483275 TANC2Q9HCD6 1990 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 CPSF4LA6NMK7 179 aaKnown RBP11.88□□□□□ -0.51
VARS-226ENST00000483275 CH25HO95992 272 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 PNPP00491 289 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 TFP02787 698 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 STX1BP61266 288 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 MYBPC1Q00872 1141 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 LRIF1Q5T3J3 769 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 RGS7BPQ6MZT1 257 aaPredicted RBP11.88□□□□□ -0.51
VARS-226ENST00000483275 SLC35D2Q76EJ3 337 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 PXKQ7Z7A4 578 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 RBM45Q8IUH3 476 aaKnown RBP11.88□□□□□ -0.51
VARS-226ENST00000483275 ARMC8Q8IUR7 673 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 SLC22A24Q8N4F4 322 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 SLC30A7Q8NEW0 376 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 OR4K5Q8NGD3 323 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 OR5J2Q8NH18 312 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 VANGL1Q8TAA9 524 aaPredicted RBP11.88□□□□□ -0.51
VARS-226ENST00000483275 TMEM54Q969K7 222 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 SLC6A7Q99884 636 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 EBF4Q9BQW3 602 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 SPATA5L1Q9BVQ7 753 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 ZNF665Q9H7R5 613 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 SLC7A8Q9UHI5 535 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 SLC13A4Q9UKG4 626 aa11.88□□□□□ -0.51
VARS-226ENST00000483275 TGP01266 2768 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 TRBV5-3A0A0A0MS03 114 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 THY1P04216 161 aa11.87□□□□□ -0.51
VARS-226ENST00000483275 SERPINA5P05154 406 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms