RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 LINC00173Q6ZV60 143 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 TMEM183AQ8IXX5 376 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF786Q8N393 782 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 NECAB1Q8N987 351 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 OR2G2Q8NGZ5 317 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 PLPPR1Q8TBJ4 325 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 CTPS2Q9NRF8 586 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 CTNNA3Q9UI47 895 aa3.56□□□□□ -1.84
SF3B1-210ENST00000482158 WDR62O43379 1518 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-210ENST00000482158 A0A096LNJ9 63 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 PLAC8L1A1L4L8 177 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 GOSR2O14653 212 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 CD5LO43866 347 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 SLC25A27O95847 323 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 CRYGBP07316 175 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 MCF2P10911 925 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF30P17039 623 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 CNR1P21554 472 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 CXCL5P42830 114 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 RFX3P48380 749 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 GPX6P59796 221 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 RPS21P63220 83 aaKnown RBP3.55□□□□□ -1.84
SF3B1-210ENST00000482158 PAX5Q02548 391 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 ENPEPQ07075 957 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 Q6ZSR3 168 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 DUSP18Q8NEJ0 188 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 AKR7LQ8NHP1 331 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 TMEM54Q969K7 222 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 DNAJC19Q96DA6 116 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 KCTD14Q9BQ13 255 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-210ENST00000482158 INPP5EQ9NRR6 644 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 ETNK2Q9NVF9 386 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 PIKFYVEQ9Y2I7 2098 aa3.55□□□□□ -1.84
SF3B1-210ENST00000482158 C11orf94C9JXX5 98 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ERLIN2O94905 339 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 SERPIND1P05546 499 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 PNMA6AP0CW24 399 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ADRB3P13945 408 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF43P17038 809 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 HOXA9P31269 272 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 RORAP35398 523 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 CCR8P51685 355 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 NCBP2P52298 156 aaKnown RBP eCLIP3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF136P52737 540 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF92Q03936 586 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ARHGAP19Q14CB8 494 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ZYG11AQ6WRX3 759 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 FAM228AQ86W67 206 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 CDH26Q8IXH8 852 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 MS4A15Q8N5U1 240 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 HSD17B11Q8NBQ5 300 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 SLC2A14Q8TDB8 520 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ACTRT1Q8TDG2 376 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 SDR42E1Q8WUS8 393 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 SDHCQ99643 169 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-210ENST00000482158 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 CWH43Q9H720 699 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 PCYOX1Q9UHG3 505 aa3.54□□□□□ -1.84
SF3B1-210ENST00000482158 ARID1AO14497 2285 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF716A6NP11 495 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 ANKRD63C9JTQ0 380 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 TMX2-CTNND1H3BSU7 103 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 UBXN8O00124 270 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 ZNF735P0CB33 412 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 FOLR1P15328 257 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 PPOXP50336 477 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 RORCP51449 518 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 SSX2Q16385 188 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 RNASEKQ6P5S7 137 aaKnown RBP3.53□□□□□ -1.84
SF3B1-210ENST00000482158 TIFABQ6ZNK6 161 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 NIPA1Q7RTP0 329 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 CCDC54Q8NEL0 328 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 KCNG3Q8TAE7 436 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 TPD52L3Q96J77 140 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 GABARAPL3Q9BY60 117 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 SLC2A8Q9NY64 477 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 KLK12Q9UKR0 248 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 IKBKGQ9Y6K9 419 aa3.53□□□□□ -1.84
SF3B1-210ENST00000482158 NFASCO94856 1347 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 H3BNH8 94 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 EIF3GO75821 320 aaKnown RBP eCLIP3.52□□□□□ -1.85
SF3B1-210ENST00000482158 PRB2P02812 416 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-210ENST00000482158 BGLAPP02818 100 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 IFNA8P32881 189 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 CDKN1BP46527 198 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 UGT2B15P54855 530 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 ATP5IP56385 69 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-210ENST00000482158 HMGN5P82970 282 aaKnown RBP3.52□□□□□ -1.85
SF3B1-210ENST00000482158 ZBED5Q49AG3 693 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 TSPO2Q5TGU0 170 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 TMEM107Q6UX40 140 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 ZNF836Q6ZNA1 936 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 TAS2R42Q7RTR8 314 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 NANOGNBQ7Z5D8 188 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 STPG2Q8N412 459 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 OR1S2Q8NGQ3 325 aa3.52□□□□□ -1.85
SF3B1-210ENST00000482158 N4BP2L2Q92802 583 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-210ENST00000482158 WFIKKN1Q96NZ8 548 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms